Gene Dret_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1811 
Symbol 
ID8419652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2081643 
End bp2082350 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content68% 
IMG OID645038395 
ProductMethyltransferase type 11 
Protein accessionYP_003198673 
Protein GI258405931 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAGC AGTGTACCGC CTACACCTCC CCGACCATGC ACCAGGCCCT GGGCCAAGCC 
TTGCGCCCCG GTGGCCTGGA AACCACCCGC CAGGGCCTGG AACAGGCCCC GTTGGCCATG
AACGCCCGTA TCCTGGACGC CGGGTGCGGT TTGGGGGCCA CAGCGGCGTT TTTGCGAAAC
CAGGGCTATC AGCGGGTGCT GGCCCTGGAC CGCGACCGCG ATCTGCTCCG TAGCGCCCAG
AAACAGGTGG CCTGCCTCCA GGCGGATATC ACCGCCGTAC CGTTGGCCAC CGCGAGTCTG
GACGCCGTGT TCTGCGAATG TGTGCTTGCT CTGTTGCCCC GGCCGCAACA GGCCCTGGCC
GAAATCCGGC GCGTCCTGCG ACCCGGGGGA CGGCTGTACT ACAGCGACCT GTACGCCCGC
GCCACTGCCG CACCTGCGGC CGCAGCCCCG GGCAGCACCT GCCTGGCCGC TCCTGCCACC
CGCAGCACGC TGCGCCAGCG CCTTGACGGC GGTGGATGGC AGATCCTGCG GGAAACAGAC
CAGACCGAAT TGCTACGTCA AACCGCGGCC CGGATCATTT TCGAGCACGG ATCTCTGGAG
CGCTTTTGGC AGGCCGTTTT CGGGGCTTGC CGGGGCACGT CCTGCGCCGC CGGCATCCAA
GCTCTGCGGC CGGGATATGT CAGTTACATC GCCGTCAAAA CGCATTGA
 
Protein sequence
MTQQCTAYTS PTMHQALGQA LRPGGLETTR QGLEQAPLAM NARILDAGCG LGATAAFLRN 
QGYQRVLALD RDRDLLRSAQ KQVACLQADI TAVPLATASL DAVFCECVLA LLPRPQQALA
EIRRVLRPGG RLYYSDLYAR ATAAPAAAAP GSTCLAAPAT RSTLRQRLDG GGWQILRETD
QTELLRQTAA RIIFEHGSLE RFWQAVFGAC RGTSCAAGIQ ALRPGYVSYI AVKTH