Gene Dret_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1800 
Symbol 
ID8419641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2068709 
End bp2069164 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content59% 
IMG OID645038384 
Productcytochrome c class III 
Protein accessionYP_003198662 
Protein GI258405920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.679004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTTC CTCGCATTAG ACCGCGTTCG CACCTCAGGG AAGGACTGCT CATCGTGGGT 
GTCGTCACGC TGCTGGCTGC CTGCACTCCC CCCGTCCCTG AAGGACAACC GTCGAAACGC
TCAGAAGCGC AGCCCCCTGA TGATCGTATT GTCGTAGGGG TCCCGGCAAC AATGGAAAGG
ACCATGCCCA GGGTTGTTTT TTCCCATGAC CAGCATCGGG AAATGGAGTG CTCACTCTGC
CACCATGCAG GCCCTGCGGG GACCTTTTCC TGTAGCGCCT CAGGCTGCCA CACCAAACCT
GCTCCGCGTT CCGATGCCTT GTCGTGTTAC GCCGCCTTCC ACGCCGATTC CGGTCCCTCC
TGCCTCAATT GCCACACGGA AGAAAAAACG CACGGGCACA ACCAGGACGT TCCGCTCCAC
TGCGCCTCCT GCCACATTCC GAACACTACC GACTAA
 
Protein sequence
MHFPRIRPRS HLREGLLIVG VVTLLAACTP PVPEGQPSKR SEAQPPDDRI VVGVPATMER 
TMPRVVFSHD QHREMECSLC HHAGPAGTFS CSASGCHTKP APRSDALSCY AAFHADSGPS
CLNCHTEEKT HGHNQDVPLH CASCHIPNTT D