Gene Dret_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1799 
Symbol 
ID8419640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2068062 
End bp2068634 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content59% 
IMG OID645038383 
Productprotein of unknown function DUF204 
Protein accessionYP_003198661 
Protein GI258405919 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.971603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTT CCGAACAATT TTTGATCGCC ATTGCCTTGG CAATGGACGC CTTTGCCGTG 
GCCATCGCTT CCGGTGTCGC CCTGCGCCGG GTCACTGCCC GGCAGACCTT CCGTCTGGCC
TGGCATTTTG GCCTGTTTCA GGCCCTGATG CCCATCATCG GCTGGTTTAT GGGGGTCAAA
ATCCGCCCCT ACATCGAAGC CTTCGACCAT TGGCTTGCTT TCGTCTTGCT GGCGTACCTG
GGCGGCAAAA TGATCCATGA AGCCTTTGAA GACGCGGACA CCAAAGACAA GACCGATCCT
ACCCGCGGCG CCTCATTGGT CATGCTCTCG GTGGCCACGA GTATCGACGC CTTTGCCGTA
GGGCTGAGTC TGTCCCTGCT GGGCCTTGAT GTCTGGTTCC CAGCACTGAT CATCGGGCTG
ACAGCCTTTG CCTTTACGGT GGCTGGCCTG CACATCGGCC GTCTGGCCTG TCGAGGCCGC
CGCCTCAGCT TGTACGCCGA GATACTGGGC GGTGTGGTCC TCGTCGGCAT CGGAATCAAA
ATCCTCATCG AACACGAGGC GCTGTGGTTT TGA
 
Protein sequence
MPFSEQFLIA IALAMDAFAV AIASGVALRR VTARQTFRLA WHFGLFQALM PIIGWFMGVK 
IRPYIEAFDH WLAFVLLAYL GGKMIHEAFE DADTKDKTDP TRGASLVMLS VATSIDAFAV
GLSLSLLGLD VWFPALIIGL TAFAFTVAGL HIGRLACRGR RLSLYAEILG GVVLVGIGIK
ILIEHEALWF