Gene Dret_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1795 
Symbol 
ID8419636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2063079 
End bp2064248 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content58% 
IMG OID645038379 
Productsodium/hydrogen exchanger 
Protein accessionYP_003198657 
Protein GI258405915 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTCG ATCAGGCGTC CGCCTTGCTT ATTCTGGCCT TGGCCGTGGC TGTGCTGCCC 
GGGCTGAGCC GTGTCTTGCG CATGCCGGCT CCGGTGGTGG AGATTCTTTT CGGGGTGGTT
TTAGGCAAGA GCGTTCTCGG GCTGGAATTC GGCGGTGAAT GGATCGGCTT TCTGGGACAT
CTTGGATTTT TATTGCTCAT GTTCCATGCC GGGATGGAAA TCGATTTCGG GATGCTGCTG
CGACAGCGGA AAAGTTATCT CGGTTTCCAT TTGCTGCTCT TTCTGAGCAC CTTGGCCTTG
GCGGTGGCCG GGGCCCTTGT CCTGGGACGG GGCGTTTTCA TGGCTCTGGT TCTGGCTACG
ACGTCTCTGG GGCTGGTCAT GCCCACACTC AAGCAGGCCG GGCTCAGCCG GACCCCGTTC
GGCCAGGGGT TGCTCATTGC CGCCTCGCTG GCTGATTTTT TGACCCTGTT CGCGATCACC
TTTTTTCTGC TCTGGCACCA ATACGGCATA AGCTGGCAAT TCGTCTCTCC CCTGCCCCTG
TTTCTCGGTT TCGGCCTTGC CCTCTGGGCC GGGCGGTTGT GGGCCTGGTG GTATCCGTGT
CAGGCTGAGC GGATGTTGGC TGCTGAGGAT TCCCTGGAAA TCGGGGTTCG CCTCTCCCTG
GCGCTGCTTT TTCTCTTTGT CGGGCTATCC GAATTGGTCC ATCTGGAACC GGTCTTGGGC
GCTTTTCTCG GCGGCAGCGT GCTTTCCTTC GTCTTTCGCA ACAAAGTGAC CCTGGAAAGC
AAGATTTCAG CTTTGGGATT CGGATTCCTG ATCCCGATTT TTTTCATCAA TGTGGGGCTG
GAGTTTGATA TCGGGAATAT TTTGAGCGGA GAGCAGATGA TTTTGACCCT GCAATTGCTG
GCGATAGCCG TACTGGTCAA AGCTCTGCCC GCGTTGTTGT TTACCCTGCG CCGCATGCGT
CTGCGGCAGG CCCTGCAAGC TGGAGCGCTG CTCTCGTCAC GTTTGAGTCT GATTGTGGCC
GCGGCCACGC TGGGGCTGCA GCAGGGGCTT ATCGACCAGG AAACCAAGGA TGCCCTGGTC
CTGCTGGCCT TATTGACCTG TCTGCTGGGG CCGAGCGTTT TCCATGTATT CGCGCGACAA
GACAAACGAA CCGGTCAAAA CCGGGCCTGA
 
Protein sequence
MVLDQASALL ILALAVAVLP GLSRVLRMPA PVVEILFGVV LGKSVLGLEF GGEWIGFLGH 
LGFLLLMFHA GMEIDFGMLL RQRKSYLGFH LLLFLSTLAL AVAGALVLGR GVFMALVLAT
TSLGLVMPTL KQAGLSRTPF GQGLLIAASL ADFLTLFAIT FFLLWHQYGI SWQFVSPLPL
FLGFGLALWA GRLWAWWYPC QAERMLAAED SLEIGVRLSL ALLFLFVGLS ELVHLEPVLG
AFLGGSVLSF VFRNKVTLES KISALGFGFL IPIFFINVGL EFDIGNILSG EQMILTLQLL
AIAVLVKALP ALLFTLRRMR LRQALQAGAL LSSRLSLIVA AATLGLQQGL IDQETKDALV
LLALLTCLLG PSVFHVFARQ DKRTGQNRA