| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1778 |
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| Symbol | |
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| ID | 8419619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2048528 |
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| End bp | 2049874 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038362 |
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| Product | Peptidase M23 |
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| Protein accession | YP_003198640 |
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| Protein GI | 258405898 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000277073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGGC GAAAAGGACA AGGATCCTCA CGTAAAGGCA CGTTTCTCGT TTTTCTGCTT
CTGCTTCTCC TGGCAGGCGG AGGAACGCTG TATTTCTTGA ATGCGGAAGG CACTCCCCCG
CAAATCACCC TGACACCGCA AACCTCGTAT ATCGGGCAGG ATGCCCAACT CGAAGTCGCG
TTGCAGGATC CGGACAGTGG GTTACGGCAG GTGACCGTCA CGGCTGTCCA GAATGGGACC
CGGATTCAGG TCCTGCCCCC GACGGACATT CGAGGCGGAC AATGGCAGCA AGCCTTCTCT
TTGAAGAATC TCGGGTTGCG CGAGGCCCCG TTCGAGTTGC AGGTCGTGGC CACGGATCGC
TCCTGGCGCC GGCTGGGCAA GGGGAATATC GCCCAAGTGC AGCACCAATT TACCCTGGAC
ACGACCATGC CCTCGGTCGG GGTGCAGTCT GTGCACCATA ACCTGAACCA GGGTGGCTCG
GGGATGGTTA CCTTTTCGGC CAGCGAACCC CTCGCTCGGG CTGGGGTGCA GATCGGGGAG
AGCTTTTTCC CGGCCTACCA GACCGAAAAC GACGACTGGA TCTGTCTGTT TGCCTTCCCC
TATTTCGCCA CACCAGGAGA GGACCACCCC GTCCTTGTGG CTGAAGACCG GGCCGCGAAC
AAATTCAGGA CCGGGTTTAC GTATCACGTC AATGCCCGCA ATTTCCCCCA GGACCGCATT
CGGGTTTCCG ATGCCTTTTT GCAGGCCAAG ATGCCGCAAT TTCAGAATGA TTTTCCGGAG
GCCGGGACCT TGCTTCAGGT TTTTCTGCAG GTCAACGGAC CCATGCGGGA TCAAAACCGG
TCCTGGTTGC GGGAGGTCGG TCAAAAAACG GTGGCCAAAC GGTTGTGGGA GGGCAAGTTC
CTGCGCCTGC CGAACGCCGC CCGCAGGGCA TCGTTCGGCG ACCAACGGAC GTATGTCCAT
GGTGGAGAGG CCATCGACCG AGCGACCCAT CTGGGCGTGG ATCTGGCTTC AGTGGCGCGA
GCCGAAGTCC CGGCCGCGAA TTCAGGTCGG GTGGTCTTCA GCGATTTTCT GGGAATCTAT
GGCAATGTGG TGGTCATCGA TCACGGTTTC GGTTTGCAAA GCCTGTACGC CCACTTGAGC
AAGAGTATGG TCCAGGAAGG TCAAGAGGTG ACCAAGGAGC AGATTATCGG CAAGACCGGC
GCCACGGGGC TGGCCGGCGG CGACCACCTC CATTTTGCTA TGCTGGTCTC CGGGCAGCCG
GTCAATCCGG TGGAATGGTG GGACACCAAC TGGATCGCGA ACAATATTCT CTCCAAGTGG
GAATATCTGC AAGAAAACGC TTCGTAG
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| Protein sequence | MARRKGQGSS RKGTFLVFLL LLLLAGGGTL YFLNAEGTPP QITLTPQTSY IGQDAQLEVA
LQDPDSGLRQ VTVTAVQNGT RIQVLPPTDI RGGQWQQAFS LKNLGLREAP FELQVVATDR
SWRRLGKGNI AQVQHQFTLD TTMPSVGVQS VHHNLNQGGS GMVTFSASEP LARAGVQIGE
SFFPAYQTEN DDWICLFAFP YFATPGEDHP VLVAEDRAAN KFRTGFTYHV NARNFPQDRI
RVSDAFLQAK MPQFQNDFPE AGTLLQVFLQ VNGPMRDQNR SWLREVGQKT VAKRLWEGKF
LRLPNAARRA SFGDQRTYVH GGEAIDRATH LGVDLASVAR AEVPAANSGR VVFSDFLGIY
GNVVVIDHGF GLQSLYAHLS KSMVQEGQEV TKEQIIGKTG ATGLAGGDHL HFAMLVSGQP
VNPVEWWDTN WIANNILSKW EYLQENAS
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