| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1777 |
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| Symbol | |
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| ID | 8419618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2046261 |
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| End bp | 2048171 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038361 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003198639 |
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| Protein GI | 258405897 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0413401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTT TTCGAGCCAA GGAATACCCG GATTGCCCGG GGACCTATCT GATGAAGGAC
GAACGGGGCC GTGTGATCTA TGTCGGCAAG GCCAAGGTGC TGCGCAAGCG GTTGGCTTCC
TATTTTCAGG AACCAGACCG TCTGCCGCGC AAAACGCGGG TCATGATGGA CAAGGTCTGG
TCTATTGAAA CATTGTGCAC GGAAACGGAA AAAGAAGCGT TTCTGCTCGA AAACAGCCTG
ATCAAGAAGC ACCGGCCCCG TTACAATATC ATTTTGCGCG ACGACAAGTC GTACGTCCTT
TTCAAACTGG ACAAGCGCCA CCCCTTTCCC CGTTTGAGCA TGACCCGGCG GGTGGTCCAG
GACGGGTCGA CCTATTTCGG GCCTTTCACT TCTGCGGTGG CGGCCAGAGA GACCTGGAAA
CTGCTCAATC GTTTGTTTCC GCTGCGCAAA TGCAAACAAA CGACCTTCAA CAACCGGGTC
CGGCCCTGTC TGCAATATAA TATCGGTCGG TGTCTGGGCC CGTGTGTCTA CGATATCCCT
CGGCAGGAGT ATCAGGAGGT GGTGCGGCAG GTGGAACTGT TTCTGACCGG CCGCTCCAAG
GAACTGCTGC GCCGGCTCCG GGCGGATATG CAAGCGGCGT CAGAGGATCT GCGGTTTGAA
GATGCGGCCC GTCTGCGGGA TCAGATCCAG GCTGTCGAAC AGACCGTGGA GCAGCAGGTC
GCGGTTCTTC CCGGCGGCAA GGACCGCGAT GTGCTCGGAT TGGGGCGCAC GGTTGGCGGT
GTGGCGCTAG GGCTGCTTTT CGTGCGCCAG GGGCAGCTGC TGGATCAGAA GAGCTTTTTT
TGGGCTGAAG AAGACGGGAC AGACGAGCTG GGTCTCCAGG AGGAGACGGC CTCGGCACAG
TCCACCGCTG TGGAAGAGGC GCAAGAGGTG CTGCGCTCCT TTGTGCTCCA GTTCTACAGC
CCTGGCCGGT ATATCCCGGA GCGCATCGTG CTCCCCTTTG CCATGGAAGA TGCGGTCCTG
GAGGACATAT TGAGTGAGCG CCGCGGCGGC CCTGTCCGTT TGGCCACCGC CCATGGGCCG
CAGGAACGCA AACTGGTATC CTTGGCCGAA ACCAATGCCG TCCAGGCGGG AGATCGGGCG
CGGAAAACGG TCGAGCCCCC TCTCGAACGC CTTCAGGACC GGCTTGGACT CTCGCAATTG
CCGGAGCGCA TCGAAGCCGT CGACGCCTCC CATTTCGGTG GCCAGGGGAT GGTCGTGGGC
CAGGTCGTCT TTGAGAACGG GCGACCGCAC AAGGAGGCCT ACCGGATTTA TGCCTTCCCG
GAACTCGAGG GGGCAGCCGA TGACTATGCC GCTCTCCAGG GATGGGCGCG GCGCCGGCTT
CGTTCCGGAC CGCCCTGGCC CGATCTGATC GTGGTTGACG GTGGCAAGGG TCAGCTCCAG
GCAGTACAAA AAGGGCTTAA CGAAGGACAG GAGGCCGGTC TTGCGGCGGA TTCCTTCGCC
CTGGCCGCTT TGGCCAAAGG GGAGCGCCGC GGCGGCGAAC TCGAGGAACG CGTCTTTCGA
CCGGGACGAA AAAATCCGGT GGCCCTGCGT CCGGGCAGTG CGGAATTGCT TCTCCTGCAA
CACATCCGTG ACAGCGTGCA CCGCTTTGTC TTGAGCCGGC AACGCCGCAC GCGGCGGGCG
AAGGGCTTGG ACAGCCGGCT CGAGGAATTG CCGGGAGTCG GTCCACGAAC GGCCCACTTG
TTGTGGAACC ATTTCGGCAC CCTGGAGCGG ATGTGTCAGG CAACCGAAGC TGAACTGGAA
GCATTGCCAG GCATTGGTGC GGCCAAAGCG GCCCAATTGC GCCGGGGATT GGCTTCACTG
TCCCCCGGGA CCCCCGTGGA CCATGATGAG CAGGGGGGCA ACACGGCTTG A
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| Protein sequence | MKPFRAKEYP DCPGTYLMKD ERGRVIYVGK AKVLRKRLAS YFQEPDRLPR KTRVMMDKVW
SIETLCTETE KEAFLLENSL IKKHRPRYNI ILRDDKSYVL FKLDKRHPFP RLSMTRRVVQ
DGSTYFGPFT SAVAARETWK LLNRLFPLRK CKQTTFNNRV RPCLQYNIGR CLGPCVYDIP
RQEYQEVVRQ VELFLTGRSK ELLRRLRADM QAASEDLRFE DAARLRDQIQ AVEQTVEQQV
AVLPGGKDRD VLGLGRTVGG VALGLLFVRQ GQLLDQKSFF WAEEDGTDEL GLQEETASAQ
STAVEEAQEV LRSFVLQFYS PGRYIPERIV LPFAMEDAVL EDILSERRGG PVRLATAHGP
QERKLVSLAE TNAVQAGDRA RKTVEPPLER LQDRLGLSQL PERIEAVDAS HFGGQGMVVG
QVVFENGRPH KEAYRIYAFP ELEGAADDYA ALQGWARRRL RSGPPWPDLI VVDGGKGQLQ
AVQKGLNEGQ EAGLAADSFA LAALAKGERR GGELEERVFR PGRKNPVALR PGSAELLLLQ
HIRDSVHRFV LSRQRRTRRA KGLDSRLEEL PGVGPRTAHL LWNHFGTLER MCQATEAELE
ALPGIGAAKA AQLRRGLASL SPGTPVDHDE QGGNTA
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