| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1775 |
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| Symbol | |
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| ID | 8419616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2044655 |
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| End bp | 2045869 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038359 |
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| Product | HipA N-terminal domain protein |
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| Protein accession | YP_003198637 |
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| Protein GI | 258405895 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.474256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGG CCGTCAATGT CTATTTGGAC GGGTTTTTTG TTGGCAATGC TTGGCGGGAC
GGCGACGGAC AACTCCTGTT CAAGTATTAT CCAGGATGGC TGGAATCGTC TGGGAGACAA
CCGCTGTCGC TGAGGTTGCC GTTGCGCCCG GATGTCTACG GCGATGCAGT AGTCCGCCCG
TTTTTGAGTG GTATCTTGCC GGAGCAGGGG GCGCGCCATC GTCTGGCGCA ATGTCTGGAC
ATTGACGACA GCGATATCTT GGGCCTTCTC GCGGCTATCG GGGGGGATTG CCCGGGGCGC
ATTTCCTTTT CGCTGCCCCA GCACGGCCCC GAGCACGTTC CACCGGGACA ACGGCCCCTG
GACGATCGGA TTCTGACGGC GCTTCCCGAG GTGCTGGCCG AGTGTCCGTT TTTGGCCGGG
GAACAATCGT TGCGTTTGTG CCTTCCCGGT AGCGGGAGGG CCTTGCCGGT GGTCCAGGAG
AGAAACCGGT TTTCTTTGCC GCTGGGCGAA CGTTCCAGCA CACATGTCCT GAAAACGGCC
CCTTTTGATC GCCAAGCGGG TGTGGCTAAT GAAGCCTTGT GCCTCGCGCT TGCCGCCAAG
GCTGGAGTGC CGGTCCAAGC GAGTATGCAG GTGGCCACCT CCCGCGAACC GCTTCTGCTG
GTGCAACGAG CTGACAGATC AGCCGTTGGT GCAGAAGGGA TTCAAAGATT GGGGGCCGAG
AGCCTCGGAC AAGCCCTGGG GATCGCGAAC GGGATACCGA TCCAGGACAG CAGGTTTTTT
TTGCAGACGG GATTCCAGCT TTTGAAACAG GTCGGCGTGG CGCCTATCCG GGATCAAAAA
CGGCTTCTGC AATGGAGCGC ATTGCAATGG GTGTTCGGGA ACGAGATGTT GCCTGTCGAA
AATATTACAT TGCTCAGGCA GGGGCAGGGA TGGGGTGTGG CCCCGTTTTA CGGTTTGGTC
TGCAAGGCGG AGCATTGGGA GCCCTCTGCG GCTGCAGCGA GCGATGAGGG GGCAGAATGG
CTGGAACATC GGCCCTGCGT GGCCTGGGCC GAGGCCACGG CTGTGCCGGA AAAAACAGTG
GGCGCGATTT TTGATCAGGT AGCGCGTGGG ATACTCAAAT ATGTCGATGA GGCGGTCGGG
CAGGTCGGTG ATCCCGAGCG GACACGGACT TTGGCCGCGT ATTTGCGCGC CAGGGCGGAA
AAAGGCTCCC GCTGA
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| Protein sequence | MTVAVNVYLD GFFVGNAWRD GDGQLLFKYY PGWLESSGRQ PLSLRLPLRP DVYGDAVVRP
FLSGILPEQG ARHRLAQCLD IDDSDILGLL AAIGGDCPGR ISFSLPQHGP EHVPPGQRPL
DDRILTALPE VLAECPFLAG EQSLRLCLPG SGRALPVVQE RNRFSLPLGE RSSTHVLKTA
PFDRQAGVAN EALCLALAAK AGVPVQASMQ VATSREPLLL VQRADRSAVG AEGIQRLGAE
SLGQALGIAN GIPIQDSRFF LQTGFQLLKQ VGVAPIRDQK RLLQWSALQW VFGNEMLPVE
NITLLRQGQG WGVAPFYGLV CKAEHWEPSA AAASDEGAEW LEHRPCVAWA EATAVPEKTV
GAIFDQVARG ILKYVDEAVG QVGDPERTRT LAAYLRARAE KGSR
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