Gene Dret_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1767 
Symbol 
ID8419608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2032513 
End bp2033991 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content54% 
IMG OID645038351 
Productsodium:neurotransmitter symporter 
Protein accessionYP_003198629 
Protein GI258405887 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC GTGAAGAATG GGGAACCAGG GTAGGCTTTA TCCTGGCAGC TGTGGGCTCG 
GCCATTGGAC TGGGAAACAT CTGGCGTTTC CCTTATATGG CCTATGAAAA TGGTGGTGGA
GCATTTCTCA TACCGTATTT TTTCGCCATG CTGACGGCCG GAATACCGAT TATCATTCTT
GAGTTCGGCC TTGGCCACAA ACATCGCGGT TCGGCTCCTT TGACGTTTGC CAAGGTCTCC
AAGAACTGGG AATGGATCGG CTGGTGGCAA ACCTTCGTGG CTTTTGTCAT TTCCGTGTAC
TATGTCGCGG TTATCGGCTG GGCGCTGAAC TACGTTTTTC TCGCCTTTGG TCAAGGGTGG
GGGGAAAACC CCGGCGATTT CTTTTTCGGT TCCTTTTTGC AACTCACCGA TAGTCCGATG
AAGTTCGGTG GTATCCGTTG GCCCATCTTT GCCACGACCC TGGCCGTCTG GGTCATTAAC
TGGGCAGTGC TGTTCAGCGG GGTCAAGAAG GGCATTGAAA AGGCGAACAA GATTTTCATG
CCCGTTTTAT TTGTGCTCAT CCTGATCATG ATCGGGCGGG CGGTGACTTT GCCCAACGCC
GCCGACGGAC TGCAATGGCT TTTCCGGCCG GATTTCTCGG CGATCATGGA CTACAAGGTC
TGGACCGCGG CCTACGGGCA GATTTTCTTT ACTCTGAGTG TGGCCTTCGC GATCATGATC
ACCTATTCCA GTTATTTGCC CAGCCGTTCG GACATCAACA ATAACGGCTT TATCACCGTT
TTCGTCAACT GCGGGTTCAG CATGCTGGCC GGCATCATGG TTTTCGGTGT TCTGGGCTAT
ATGGCCGCCC AACAAGGCGT TGGCGTTGAC GAAGTGGTTG GCTCCGGTGT CGGCTTGGCC
TTTGCCACTA TCCCGAAAGC GATCAACCTC CTGCCAGCTT CGACGCTCTT TGGCGTCCTC
TTCTTCCTGG CTTTGTTCTG CGCCGGCCTG AGTTCGATGA TTTCCATCAG CGAGGCCTGC
TGTTCCGCCT TGATGGACAA GTACGGCTGG AGCCGGAAAT TCACGACTTC GGCCTACGCC
ATTGTCGGCG GGCTGATCAG TATCGTCTTC GTGACCCGGG GCGGCCTGCT CGTGCTGGAT
ATCGTCGACC ACTTCATCAA TAACTTCGGT ATTGTCTTTA CCGGCTTGGT CGAAGTTATT
GTCCTGGCTT GGCTGTTCAA GACTGATACC ATCCGGCAGC ATGTCAACAA GCTCTCCGAT
TTCACCATCG GTAGCTGGTG GCTGTTTTGC CTGAAGGTCA TCACCCCGAT CGTGCTTGGG
TACATGGCGA TTATGAACCT GATCGGCGAC ATCAAGGAAG CCTACGGTGG GTATCCTGGT
TCGGCTTTGG CCCTCTACGG CTGGGGGGTC GTGATCGGTA TCGTCGTCCT GAGCTTCATC
CTCCAGGCCA CTAAAACCGC CAGTGTGGAA ACCAAGTAA
 
Protein sequence
MAQREEWGTR VGFILAAVGS AIGLGNIWRF PYMAYENGGG AFLIPYFFAM LTAGIPIIIL 
EFGLGHKHRG SAPLTFAKVS KNWEWIGWWQ TFVAFVISVY YVAVIGWALN YVFLAFGQGW
GENPGDFFFG SFLQLTDSPM KFGGIRWPIF ATTLAVWVIN WAVLFSGVKK GIEKANKIFM
PVLFVLILIM IGRAVTLPNA ADGLQWLFRP DFSAIMDYKV WTAAYGQIFF TLSVAFAIMI
TYSSYLPSRS DINNNGFITV FVNCGFSMLA GIMVFGVLGY MAAQQGVGVD EVVGSGVGLA
FATIPKAINL LPASTLFGVL FFLALFCAGL SSMISISEAC CSALMDKYGW SRKFTTSAYA
IVGGLISIVF VTRGGLLVLD IVDHFINNFG IVFTGLVEVI VLAWLFKTDT IRQHVNKLSD
FTIGSWWLFC LKVITPIVLG YMAIMNLIGD IKEAYGGYPG SALALYGWGV VIGIVVLSFI
LQATKTASVE TK