Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1767 |
Symbol | |
ID | 8419608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2032513 |
End bp | 2033991 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645038351 |
Product | sodium:neurotransmitter symporter |
Protein accession | YP_003198629 |
Protein GI | 258405887 |
COG category | [R] General function prediction only |
COG ID | [COG0733] Na+-dependent transporters of the SNF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAC GTGAAGAATG GGGAACCAGG GTAGGCTTTA TCCTGGCAGC TGTGGGCTCG GCCATTGGAC TGGGAAACAT CTGGCGTTTC CCTTATATGG CCTATGAAAA TGGTGGTGGA GCATTTCTCA TACCGTATTT TTTCGCCATG CTGACGGCCG GAATACCGAT TATCATTCTT GAGTTCGGCC TTGGCCACAA ACATCGCGGT TCGGCTCCTT TGACGTTTGC CAAGGTCTCC AAGAACTGGG AATGGATCGG CTGGTGGCAA ACCTTCGTGG CTTTTGTCAT TTCCGTGTAC TATGTCGCGG TTATCGGCTG GGCGCTGAAC TACGTTTTTC TCGCCTTTGG TCAAGGGTGG GGGGAAAACC CCGGCGATTT CTTTTTCGGT TCCTTTTTGC AACTCACCGA TAGTCCGATG AAGTTCGGTG GTATCCGTTG GCCCATCTTT GCCACGACCC TGGCCGTCTG GGTCATTAAC TGGGCAGTGC TGTTCAGCGG GGTCAAGAAG GGCATTGAAA AGGCGAACAA GATTTTCATG CCCGTTTTAT TTGTGCTCAT CCTGATCATG ATCGGGCGGG CGGTGACTTT GCCCAACGCC GCCGACGGAC TGCAATGGCT TTTCCGGCCG GATTTCTCGG CGATCATGGA CTACAAGGTC TGGACCGCGG CCTACGGGCA GATTTTCTTT ACTCTGAGTG TGGCCTTCGC GATCATGATC ACCTATTCCA GTTATTTGCC CAGCCGTTCG GACATCAACA ATAACGGCTT TATCACCGTT TTCGTCAACT GCGGGTTCAG CATGCTGGCC GGCATCATGG TTTTCGGTGT TCTGGGCTAT ATGGCCGCCC AACAAGGCGT TGGCGTTGAC GAAGTGGTTG GCTCCGGTGT CGGCTTGGCC TTTGCCACTA TCCCGAAAGC GATCAACCTC CTGCCAGCTT CGACGCTCTT TGGCGTCCTC TTCTTCCTGG CTTTGTTCTG CGCCGGCCTG AGTTCGATGA TTTCCATCAG CGAGGCCTGC TGTTCCGCCT TGATGGACAA GTACGGCTGG AGCCGGAAAT TCACGACTTC GGCCTACGCC ATTGTCGGCG GGCTGATCAG TATCGTCTTC GTGACCCGGG GCGGCCTGCT CGTGCTGGAT ATCGTCGACC ACTTCATCAA TAACTTCGGT ATTGTCTTTA CCGGCTTGGT CGAAGTTATT GTCCTGGCTT GGCTGTTCAA GACTGATACC ATCCGGCAGC ATGTCAACAA GCTCTCCGAT TTCACCATCG GTAGCTGGTG GCTGTTTTGC CTGAAGGTCA TCACCCCGAT CGTGCTTGGG TACATGGCGA TTATGAACCT GATCGGCGAC ATCAAGGAAG CCTACGGTGG GTATCCTGGT TCGGCTTTGG CCCTCTACGG CTGGGGGGTC GTGATCGGTA TCGTCGTCCT GAGCTTCATC CTCCAGGCCA CTAAAACCGC CAGTGTGGAA ACCAAGTAA
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Protein sequence | MAQREEWGTR VGFILAAVGS AIGLGNIWRF PYMAYENGGG AFLIPYFFAM LTAGIPIIIL EFGLGHKHRG SAPLTFAKVS KNWEWIGWWQ TFVAFVISVY YVAVIGWALN YVFLAFGQGW GENPGDFFFG SFLQLTDSPM KFGGIRWPIF ATTLAVWVIN WAVLFSGVKK GIEKANKIFM PVLFVLILIM IGRAVTLPNA ADGLQWLFRP DFSAIMDYKV WTAAYGQIFF TLSVAFAIMI TYSSYLPSRS DINNNGFITV FVNCGFSMLA GIMVFGVLGY MAAQQGVGVD EVVGSGVGLA FATIPKAINL LPASTLFGVL FFLALFCAGL SSMISISEAC CSALMDKYGW SRKFTTSAYA IVGGLISIVF VTRGGLLVLD IVDHFINNFG IVFTGLVEVI VLAWLFKTDT IRQHVNKLSD FTIGSWWLFC LKVITPIVLG YMAIMNLIGD IKEAYGGYPG SALALYGWGV VIGIVVLSFI LQATKTASVE TK
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