| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1764 |
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| Symbol | ispG |
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| ID | 8419605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2030353 |
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| End bp | 2031477 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038348 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_003198626 |
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| Protein GI | 258405884 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.689164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCGC AATCCTCTGC GGCTCAGGAT CCGCAAGCGA GGCGCCGTCA CACGCAAAGC
GTGTATATCG GCGGGGTCGG GGTCGGCGGA AACAACCCTG TCCGGGTCCA GAGCATGACC
AATACCCCCA CTCATGATGT GCCCGCGACA TTGGGGCAGA TCCGAACCCT GGCAGCGGCG
GGCTGCGAAA TTGTTCGCGT GGCAGTGCCC GACGAGACGG CGGCAGCTAC GCTTTCCGAC
TTGTGCGCCG CCGCGCCTGT CCCGCTTGTG GCTGATATCC ATTTCGATTC CCGGTTGGCG
GTGCAGGCGG TGGAAGCTGG GATCGCGGGA TTGCGGATCA ATCCGGGCAA TATCGGCTCG
GCCCGTGAGG TGGATCGGGT CGTGGATGCT GCCTCGGCCC GGGGTGTGCC CATACGGATC
GGCGTCAACA GCGGGTCGGT GGAAAAAGGA CTTCTGGAGC GTTTCGGGGG CCCAACACCG
GAAGCCATGG TGGAGTCAGC GCTTTCCCAT GTGACCCTGC TGGAAAAGCG GGGGTTCTCG
CAGATCAAAA TTTCCCTCAA GTCTTCCTCT GTTCTGGATA CGGTCCACGC CTATCAACGT
ATGGCCGATC GGGTCAGTTA TCCGCTGCAT ATCGGTGTTA CGGAAGCGGG AACCCCCTTG
CGCGGAGCGG TGAAATCCGG AGTGGGACTT GGTATCTTGC TTTGGGAAGG GGTGGGCGAT
ACAGTCCGCG TTTCGCTGAC CGGAGACCCG GCCGACGAAA TGGTCGCTGC CTGGGAACTC
CTCCGGAGCT TGGGGCTGCG CAGCCGTGGC CCGGAGATCA TCTCCTGCCC CACTTGCGGA
CGCACGGAGA TCGATCTGAT CGGTCTGGCG CAAGCTGTTG AGCGGAGGCT GCGCCCCGTG
GAAACAGTGT GCAAGGTCGC GGTCATGGGG TGCGTGGTCA ATGGTCCGGG TGAAGCCCGT
GAGGCGGATA TCGGCATCGC CGGTGGCCGT GATTGCGGGA TTATTTTTCG CAAGGGCAAG
GTCATCCGGA AAGTCCACGG CGACGCCAAC CTTTTGCCGG TGTTTATGGA GGAAGTCCGG
CGTTTTCTGG CGGAATGGGG CGTGGAACTG CCCGAAGAGC TCTAG
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| Protein sequence | MESQSSAAQD PQARRRHTQS VYIGGVGVGG NNPVRVQSMT NTPTHDVPAT LGQIRTLAAA
GCEIVRVAVP DETAAATLSD LCAAAPVPLV ADIHFDSRLA VQAVEAGIAG LRINPGNIGS
AREVDRVVDA ASARGVPIRI GVNSGSVEKG LLERFGGPTP EAMVESALSH VTLLEKRGFS
QIKISLKSSS VLDTVHAYQR MADRVSYPLH IGVTEAGTPL RGAVKSGVGL GILLWEGVGD
TVRVSLTGDP ADEMVAAWEL LRSLGLRSRG PEIISCPTCG RTEIDLIGLA QAVERRLRPV
ETVCKVAVMG CVVNGPGEAR EADIGIAGGR DCGIIFRKGK VIRKVHGDAN LLPVFMEEVR
RFLAEWGVEL PEEL
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