| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1762 |
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| Symbol | |
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| ID | 8419603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2028017 |
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| End bp | 2029756 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038346 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_003198624 |
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| Protein GI | 258405882 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.89022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGA GCAACGCGTA TATCCCGACC CTGAAAGAAG AGCCGGCCGA GGCCGAAGTC
GTCAGCCATA AATTGTTGGT CCGCGCCGGC ATGATCCGGA AAGTGACCTC CGGTATCTAT
ACCTTTTTGC CCCTGGGGCT CCGCGCTTTG GACAAGATCG CTCATGTGGT CCGTGAAGAA
ATGAACCGGG CCGGATGTCA AGAAATCTTC ATGCCGATGG TCCAACCGGG AGATCTGTGG
AAGGAGACCG GGCGGTGGGA ATATTACGGC AAGGAGCTTT TGCGCCTCAA GGATCGCCAC
GACCGCGATT ATTGTCTGGG CCCCACCCAT GAGGAAGTGG TTACCTCCCT CGTTCGGGGT
GAGGTGCGCT CGTACCGGCA GTTGCCGCTC AATCTCTATC AGATCCAGAC GAAATTTCGG
GACGAGATCC GGCCCCGGTT CGGCTTGATG CGCTGTCGGG AATTTATCAT GAAAGACGCG
TATTCCTTTG ATCGGGATGA GGCCGGTGCC CAAAAGTCCT ACCAAACGAT GTTTGATGCC
TATACCCGGG CGTTTCAGCG GTTGGGGCTG CAGTTCAGGG CCGTGGAGGC CGATTCCGGA
GCCATCGGCG GCTCGGTGTC CCACGAGTTC ATGGTCCTGG CCGCCACGGG AGAGGACACC
ATCGCTTCCT GCGCCGCCTG CGAGTTCGCG GCCAATCTGG AAAAGGCTGA AGTGGTCGTG
CCCACCGACC ACCCCGTTGG CCTGTGTGAG GCCGAAGCCT CGGAAGTGCC CACCCCGGGT
AAGCATACTG TGGACGAGGT GGCGACATTT CTCGGCGTAG GGGCGGACCG GATTGTCAAA
ACGCTGCTTT ATGTGGCCGA CGGTGAGGTT GTCGGAGCCT TGGTCCGGGG GGACCGCGAA
CTCAATGAGA CCAAACTCAA GAATCTGCTC GACGTCCAGA GTCTTGAATT GGCCGGTAGC
GAGCTCGTTG AGCGTGTCAG CCAGGCACCG GTCGGCTTCG CCGGCCCCAA AGGATTGCAA
GTGAAGCGGC TTTATGCCGA TCTGGAACTG CAAAACGGCA CGGATTGGGT CACCGGAGCG
AACAGGGCCG AAACCCACCT CGTGCACGTC GATTTGCAGC GTGACGCGGC GATCACCGCG
TATGCCGATT TGCGCGACGT GACCAGCGGC GACCCCTGTC CGCGCTGCGG CGGCGAATTG
CGCTTTCCTC AGGGCATTGA GGTCGGCCAT GTCTTCAATC TGGGAACCAA ATACAGCGCT
CCCATGCAGG CCTTGTATCT CGACGAAAAC GGCAAGGAAC GGGAAATGGT CATGGGGTGT
TACGGCATCG GTGTCAGCCG TATCCTGGCA GCGGCCATTG AGCAGAACCA CGATGCAAGC
GGTATCATGT TTCCGCCGAG TATCGCTCCC TATGAAATCG CCTTGCTTTG CCTGGATACC
AAGAACGAAG AGGTCCGAAC CAAAGCTGAG GCCTTTTACG AGACCTTGCA GGAGCAAGGC
GTTGATGTCC TCTACGACGA CCGTGTTGAG CGGCCCGGCT TCAAATTCAA GGACGCCGAC
CTGATGGGGT TGCCGCTGCA AGTGGTCTTC GGGGGCAAAG GCGTGGCCCG CGGTATTGTC
GAGGTCAAGG ACCGGCGCAC TGGCGAGAAA GCCGAACTGC CGCTGGACGG ATTGGCCGAA
GCCTTCGCCT CGTGGCGCGA CGGTGTCCGG GCTGGATGGA AGGTGGCTTC CCAGCAATAA
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| Protein sequence | MRLSNAYIPT LKEEPAEAEV VSHKLLVRAG MIRKVTSGIY TFLPLGLRAL DKIAHVVREE
MNRAGCQEIF MPMVQPGDLW KETGRWEYYG KELLRLKDRH DRDYCLGPTH EEVVTSLVRG
EVRSYRQLPL NLYQIQTKFR DEIRPRFGLM RCREFIMKDA YSFDRDEAGA QKSYQTMFDA
YTRAFQRLGL QFRAVEADSG AIGGSVSHEF MVLAATGEDT IASCAACEFA ANLEKAEVVV
PTDHPVGLCE AEASEVPTPG KHTVDEVATF LGVGADRIVK TLLYVADGEV VGALVRGDRE
LNETKLKNLL DVQSLELAGS ELVERVSQAP VGFAGPKGLQ VKRLYADLEL QNGTDWVTGA
NRAETHLVHV DLQRDAAITA YADLRDVTSG DPCPRCGGEL RFPQGIEVGH VFNLGTKYSA
PMQALYLDEN GKEREMVMGC YGIGVSRILA AAIEQNHDAS GIMFPPSIAP YEIALLCLDT
KNEEVRTKAE AFYETLQEQG VDVLYDDRVE RPGFKFKDAD LMGLPLQVVF GGKGVARGIV
EVKDRRTGEK AELPLDGLAE AFASWRDGVR AGWKVASQQ
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