| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1752 |
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| Symbol | |
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| ID | 8419593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2016677 |
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| End bp | 2018170 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038336 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003198614 |
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| Protein GI | 258405872 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.395802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC AATACGCCTC GAACGCTTCC CAGTCCAAAC ACGAATATTC CGCCACCTCG
CTGGAGGACC TTTCTCCGCG CATACAAGAG GCTTGCCGCT CAGCCGGCTG GTCCAGCTTG
GCTCCGGTGC AGGCCAGAAG CATACCGGTT CTGCTGCGCG GTGACGACCT CATGGTCCAA
TCCCGGACCG GCAGCGGCAA GACCGGAGCC TTTCTCCTGC CCATGCTGGA ACGCCTGAAC
CCGGATCAAG CCGCCTGTCA GGCCTTGATC CTCGTCCCCA CTCGGGAACT GGCCCGGCAG
GTCCACGCCG AGGCCCAGAC GTTATTCAAG GGTTCAGGAC TTCGCACAGC CGCTGTCTTT
GGCGGAGTTG GCTATAAAGA ACAATTCGAC GCTCTGCGTG AAGGCGCCCA TGTCGTTGTA
GGCACCCCGG GGCGGATCCT CGACCACCTG CTCAAAGGCA GTTTCGCCAC CAAAAAACTG
CGTATCCTGG TCATGGACGA AGCCGATCGG ATGTTATCCA TGGGGTTTTA CCAGGACATG
GTCCAGATCC GGGGCTATCT TCCGCAATCC GTTGAAAGCA GCTACCTCTT CTCTGCCACA
TTTCCCTCTC ACGTCCTGCG CCTGTCGAGT CAGTTTCTGA TCGATCCCGG TTTTTTGAGC
CTCAGCAGCG ACACCCTCAA CGTCGCAGAG ATCGAGCATT CCTACTATGT GGTTCCCGCG
GTGCAGCGCG AACGGAGCCT GCTGCGCATT CTGGAATATC TCAATCCGGT TTCGGCGCTT
ATTTTCTGCA ATACGAAAAG TGATGTTCAA TTCGTGACCA CGGTCCTGCA ACGTTTTGGC
CTCGACGCGG ACCAGTTGAC CTCGGACCTG CGACAAAACA AACGCGACCA GGTCCTTGGA
CGCATCAAGG CCGGAAACCT GCGTCTTCTC GTGGCCACGG ATGTCGCTGC CCGGGGGATC
GACATCCCCG ATCTTTCCCA TGTCATCCAG TACCAGCCTT CGGAAGACCC CGAACTCTAT
GTCCACCGGG CTGGGCGGAC CGGACGTGCT GGCGCCAGCG GCGAGGCGGT GACCCTCGTG
GCCGGGATGG AGAAGATCAA GCTCAATCAG GTCGCCAAAA AATTCCGCAT CCCGCTGCAG
GAGCAGGAAC TGCCTTCGGA GGAAACAGTC AACGATATGG TCGGGCAACG GTTGACCGCT
ATCCTCGAAG CTGAACTCCG CTCCCGTGAT CTTGTCCAGC AGGAACGCGC CAAGCGATTT
GTCAAACTCG CCAGAGAACT GGGCCAAAAC GACGACGCCG CCATGTTGCT GGGCATGCTC
CTTGACGAAG CAGCGCAAAA AGCAAGCCAG GGGCCAGCCG CACCAAGCGA AGAGGAACCT
CCTTCCGAGC CAAAGCAGGA CAAGCCCAAA GCCAACAAGA AACGGCGGCG GCCTCGCCGG
AAAAAAACTC GCCAGTCCTC CGATAACGAC AGCAATTCCT CGCAGGGCAA CTGA
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| Protein sequence | MTDQYASNAS QSKHEYSATS LEDLSPRIQE ACRSAGWSSL APVQARSIPV LLRGDDLMVQ
SRTGSGKTGA FLLPMLERLN PDQAACQALI LVPTRELARQ VHAEAQTLFK GSGLRTAAVF
GGVGYKEQFD ALREGAHVVV GTPGRILDHL LKGSFATKKL RILVMDEADR MLSMGFYQDM
VQIRGYLPQS VESSYLFSAT FPSHVLRLSS QFLIDPGFLS LSSDTLNVAE IEHSYYVVPA
VQRERSLLRI LEYLNPVSAL IFCNTKSDVQ FVTTVLQRFG LDADQLTSDL RQNKRDQVLG
RIKAGNLRLL VATDVAARGI DIPDLSHVIQ YQPSEDPELY VHRAGRTGRA GASGEAVTLV
AGMEKIKLNQ VAKKFRIPLQ EQELPSEETV NDMVGQRLTA ILEAELRSRD LVQQERAKRF
VKLARELGQN DDAAMLLGML LDEAAQKASQ GPAAPSEEEP PSEPKQDKPK ANKKRRRPRR
KKTRQSSDND SNSSQGN
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