| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1742 |
|---|
| Symbol | |
|---|
| ID | 8419582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 2005333 |
|---|
| End bp | 2006448 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645038325 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003198604 |
|---|
| Protein GI | 258405862 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.711443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.704345 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTTT ACGAAGTTAT CAATGTCCGC TGGTTCAATG CCACCGCCTG GTATGCTATC
ACCCAAGCCC GGCTGCTTAC GGCCCACGGC CATGAGGTCA TGGTCGTCTG TCTGCCGGAC
TCGCCAGCCC ATCTGAAGGC CCTGGAATAC GGGCTTCCTG TCGCCACCCT GGACCTGAAC
ACCACCTCGC CGCTGGGCAT AGTCCGGCTG TACGTCCGCA TGCGCAGGCT GCTCCGGGAA
TTTCCCCCGG AAATAGTCAA TTGCCACCGC GGGGAGGCCT TTGTCCTTTG GGGACTCCTG
AAATTGCAAA GCAGGGGGCT TTTTCGGCTC GTGCGCACCC GGGGCGACCA GCGTCCCCCC
AAAAACAACC GCGTCAACCG CTGGCTGCAC CGGAGTCTGG CAGACGCCGT AGTTTGCACC
AACTCGGCCA TGGCCCGCCA TTTCCGGGAT ATCCTTGGAC TGCCTGCCTC CCACCTCTGG
CTCATTTTCG GTGGTGTGGA CCGGGACCGG TTCAAATACG ATCCTGAAGG ACGACACACT
GTGCGACAAC GCTACGGCTT TGGCCCCCAG CACAAGGTGG TTGGTCTCTT GGGACGATTC
GACCGCGTCA AGGGACAGTG GGAATTGCTC CAGGCCGTAT CCCGTCTCTA CCATGACGGG
ATGAGCGACC TCCGGGTCTT GCTCATCGGT TTTACCACCG CCACTTCCCA GGCGGAAGTG
GAAGGATGGA TTCAGGACCT GGGGCTGACC GAAGTGGTCC ATATCACGGG ATTGACTGAA
GACGTCCCCG CCTGTCTCTC GGCCCTGGAT CTCGGTATTG TCAATTCCTT GTGGTCGGAG
ACCATTGCCC GCGCCGCCCT GGAGACCATG TCCTGTTCCG TCCCGCTTAT TGGAACCACC
GTCGGAGTCC TGCCCGACCT GCTCTCCCAG GAAGCCCTGG TTCCGCCAGG CGACAGCGGA
GCCCTGGCCG ACCGCATCCG GGACGTTTTC AGCGATCAAT CCCTTGTGCA GCGGCTGCAC
AAGCAGCAGG AAGAGACCAT CCGCGATCTC TCCACCGACC ATTTTGTTCA ACACACCCAG
AGTCTGTACA CCCGGCTCCT GAGTCCCGAC CGATGA
|
|---|
| Protein sequence | MRVYEVINVR WFNATAWYAI TQARLLTAHG HEVMVVCLPD SPAHLKALEY GLPVATLDLN
TTSPLGIVRL YVRMRRLLRE FPPEIVNCHR GEAFVLWGLL KLQSRGLFRL VRTRGDQRPP
KNNRVNRWLH RSLADAVVCT NSAMARHFRD ILGLPASHLW LIFGGVDRDR FKYDPEGRHT
VRQRYGFGPQ HKVVGLLGRF DRVKGQWELL QAVSRLYHDG MSDLRVLLIG FTTATSQAEV
EGWIQDLGLT EVVHITGLTE DVPACLSALD LGIVNSLWSE TIARAALETM SCSVPLIGTT
VGVLPDLLSQ EALVPPGDSG ALADRIRDVF SDQSLVQRLH KQQEETIRDL STDHFVQHTQ
SLYTRLLSPD R
|
|---|
| |