| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1729 |
|---|
| Symbol | |
|---|
| ID | 8419566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1992853 |
|---|
| End bp | 1994076 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645038309 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_003198591 |
|---|
| Protein GI | 258405849 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.57009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACACG AGCAGATAGC AAAAGTTGTC CTGGCCTATT CCGGCGGCCT GGATACCTCC
ATCATTTTGA AATGGATCAA GAAGACATAC GGTTGCGAGG TCATTACCTT GACGGCGGAT
CTCGGGCAGG AGGAAGAACT CGACGGTCTG GAAGAAAAGG CCCTGAACAC CGGGGCGAGC
AAGGCCTACG TCGAGGATTT ACAGGAAGAA TTCGTCAGGG ATTTCGTCTT TCCTGCCCTG
CGCGCCAATG CCGTCTATGA AGGACGGTAT CTTCTGGGGA CATCCCTTGC CCGGCCGCTC
ATTGCCAAGC GGATGGTGGA GATCGCCCAG CAGGAGGGCG CTCAGGCTCT GGCCCACGGC
GCGACAGGCA AGGGCAACGA CCAGATCCGG TTCGAACTCA ACGCCATGGC CCTGGCCCCG
GAATTGGAGA CCATTGCCCC GTGGCGCGAG TGGGACCTGC GTTCGCGCAG TGATCTGGTG
AACTTCGCTG AAGCCAACGA TATTCCGGTT CCGGTGACCA AGGAAAAGCC GTACAGCAGT
GACCGCAATC TGTTGCACCT GAGCTTTGAG GGCGGCGAAC TGGAAGATCC CTGGCAGGAG
CCCGGTCCAC ACAGTTATCT GTTGGCGGTT CCGGTGGAGC AGGCTCCTGA CACACCGGAA
ATTATCAGCA TAGATTTTGA GGCGGGCAAT CCGGTGGCGG TCAATGGGGA AACGTTGTCG
CCAGCGGCAT TGTTGCGCCG CTTGAACCAT CTTGGCGGCA AACACGGCAT CGGTCGTGTC
GATATGGTGG AAAACCGTTT TATTGGTATG AAATCCCGCG GTGTTTACGA GACCCCGGGA
GGGACGATAC TGCATCTCGC CCACCGGGAC CTGGAAGGGA TCTGTCTGGA TCGCGAAGCG
ATGCACCAAC GCGACAGTCT TATCCCCGAG TATGCCAAGA TGGTCTACAA CGGGTTCTGG
TACGCTCCGG AGCGTACCGC TTTGCAAGCC ATGGTCGATG CCACCCAAGG TAATGTGACC
GGTACGGTGC GGCTGAAGCT CTATAAAGGC GGTGTCTATC CGATCGGACG CAAGTCTCCT
GTTTCACTGT ATAACCCTGA TCTGGCCACC TTCGAAAGCG ACGAGGTTTA CGACCAAGCC
GACGCGGCCG GGTTTATCCG TCTGCAGGGA TTGCGCCTTC GGGCCGCCCA GGGTGTGGCC
GCCAAGGGAC AGGGCAAAAG CTGA
|
|---|
| Protein sequence | MKHEQIAKVV LAYSGGLDTS IILKWIKKTY GCEVITLTAD LGQEEELDGL EEKALNTGAS
KAYVEDLQEE FVRDFVFPAL RANAVYEGRY LLGTSLARPL IAKRMVEIAQ QEGAQALAHG
ATGKGNDQIR FELNAMALAP ELETIAPWRE WDLRSRSDLV NFAEANDIPV PVTKEKPYSS
DRNLLHLSFE GGELEDPWQE PGPHSYLLAV PVEQAPDTPE IISIDFEAGN PVAVNGETLS
PAALLRRLNH LGGKHGIGRV DMVENRFIGM KSRGVYETPG GTILHLAHRD LEGICLDREA
MHQRDSLIPE YAKMVYNGFW YAPERTALQA MVDATQGNVT GTVRLKLYKG GVYPIGRKSP
VSLYNPDLAT FESDEVYDQA DAAGFIRLQG LRLRAAQGVA AKGQGKS
|
|---|
| |