| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1727 |
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| Symbol | |
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| ID | 8419563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1989185 |
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| End bp | 1991095 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038306 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_003198589 |
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| Protein GI | 258405847 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0229617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAATT TTTATAAGAA CCTTTTTTTG TGGGCAACGA TCTCACTGGT CATGGTCGTG
CTCTTCAACC TCTTCAACCA GCCCCAGGCG CCACAGCAGC AATTGTCCTA CAGCCAATTG
CTGACCGAGG TCCGTCAGGG ACGGGTGGTC GGCGTGACCA TCCAGGGGCA GAAAGTGACC
GGGGTGATGA CCAACGACCA GCGATTCGTC AGCTACGCGC CGGACGACCC GAATTTCGTA
AACACCCTTT TGGAGAACAG CGTCGAGGTC AAAGCCCAGC CACGGGACGA GGCGCCATGG
TATATGACCA TTTTCGTCTC CTGGTTTCCA ATGCTGCTGC TGATCGGGGT CTGGATCTTT
TTTATGCGCC AGATGCAGGG CGGTGGCGGA AAGGCTATGT CATTTGGCAA GTCCAAGGCC
AAGATGGTGA CCCAGGAATC GACAAAGGTC ACTTTCACCG ATGTGGCCGG CGTGGATGAG
GCCAAGGAGG AGCTGACTGA AATTGTAGAA TTTCTCAGCA ATCCCAAGAA ATTTACCCGA
CTCGGGGGGC GGATTCCCAA GGGCGTTCTG CTCGTTGGCG GGCCCGGTAC TGGAAAGACC
CTTTTGTCCC GCGCCGTGGC CGGGGAAGCT GGGGTGCCCT TTTTCTCCAT CTCCGGTTCC
GATTTTGTGG AAATGTTCGT CGGTGTCGGT GCGTCGCGGG TGCGGGACCT TTTTGTCCAA
GGCAAGAAAA ACGCCCCATG TCTGATCTTT ATTGATGAAA TCGACGCGGT CGGACGTCAG
CGCGGCGCTG GCCTTGGCGG CGGGCACGAC GAACGGGAGC AGACCCTGAA TCAGTTGCTG
GTGGAAATGG ACGGTTTCGA GTCCAACGAA GGTGTCATCC TCATCGCTGC CACCAACCGC
CCAGATGTCC TGGACCCGGC TCTGCTTCGT CCCGGGCGCT TCGATCGCCA GGTGATGGTC
CCCAATCCGG ACCTCAAGGG CCGTAAATCG ATCCTGGAAG TCCATGCCCG CCACACTCCC
CTTGCCGGAG ACGTGGATAT GGGGGTCATC GCGCGCGGTA CGCCTGGCTT TTCCGGTGCC
GATCTGGAAA ACCTGGTCAA CGAAGCCGCT CTGGCGGCGG CCAAGGTGAA CAAAGACCAG
GTGGACATGA ACGATTTCGA AGACGCCAAG GATAAAGTCC TGATGGGCAA GGAACGGCGT
AGCGTGATTT TGAGTGAAGA AGAAAAGAAG ACCACGGCCT ACCACGAAGC CGGTCACGCG
TTGGTGGCCC GGTTGTTGCC GGGAACCGAT CCGGTGCACA AGGTGTCCAT CATCCCCCGG
GGACGCGCCC TGGGCGTGAC CATGCAGCTT CCTGAAGACG ACCGCCACAA CTATTCCCGC
GTCTTTTTGG AAAATTCCTT GGCGGTGCTT CTCGGCGGGC GTGTGGCCGA AGAATTGGTC
CTGGATCAGA TCACCACCGG AGCCGGCAAC GACCTCGAAC GGGCGACAAA GATGGCCCGG
AAGATGGTCT GCGAATGGGG CATGAGCGAG GCTATCGGCC CGCTGGGCCT CAATGACAAC
GGCGATCAGG TTTTTCTCGG CCGGGAGTTG GTCCAGCATA AACATTACAG CGAGGATACC
GCCCGGCTCA TCGATAGCGA GATCAAGCGG ATCATCAGCG ATGCCTATGA AAAGGCGCGG
CGGCTGCTCA AGGAAAATGG CGAGACCCTT GAAGCCCTTG CCGAAGCCTT GTTGGAGCGT
GAGACCTTGA CCGGGAATGA TATCGCCACC ATCATGCGTG GGGAAACTCT CCCTCCGGTG
GAGGTAGAGC AGGAAAAGGG CCAGGGCCCA TCGGCCTCGG CCGACACTCA GCAAGAGACT
GAGGATTTTG CTGCGGAGGA TTTCACCCTC GAAGAAGAGG ACGACGAATG A
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| Protein sequence | MNNFYKNLFL WATISLVMVV LFNLFNQPQA PQQQLSYSQL LTEVRQGRVV GVTIQGQKVT
GVMTNDQRFV SYAPDDPNFV NTLLENSVEV KAQPRDEAPW YMTIFVSWFP MLLLIGVWIF
FMRQMQGGGG KAMSFGKSKA KMVTQESTKV TFTDVAGVDE AKEELTEIVE FLSNPKKFTR
LGGRIPKGVL LVGGPGTGKT LLSRAVAGEA GVPFFSISGS DFVEMFVGVG ASRVRDLFVQ
GKKNAPCLIF IDEIDAVGRQ RGAGLGGGHD EREQTLNQLL VEMDGFESNE GVILIAATNR
PDVLDPALLR PGRFDRQVMV PNPDLKGRKS ILEVHARHTP LAGDVDMGVI ARGTPGFSGA
DLENLVNEAA LAAAKVNKDQ VDMNDFEDAK DKVLMGKERR SVILSEEEKK TTAYHEAGHA
LVARLLPGTD PVHKVSIIPR GRALGVTMQL PEDDRHNYSR VFLENSLAVL LGGRVAEELV
LDQITTGAGN DLERATKMAR KMVCEWGMSE AIGPLGLNDN GDQVFLGREL VQHKHYSEDT
ARLIDSEIKR IISDAYEKAR RLLKENGETL EALAEALLER ETLTGNDIAT IMRGETLPPV
EVEQEKGQGP SASADTQQET EDFAAEDFTL EEEDDE
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