| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1719 |
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| Symbol | asnC |
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| ID | 8419555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1978983 |
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| End bp | 1980374 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038298 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | YP_003198581 |
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| Protein GI | 258405839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00602659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.38448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGAA CTCGTGTGGT GCAGGCCTTG CGCTCCACCG CCCCGGTGGA CGATATCCAG
ATTATGGGCT GGGTGCGTAC CAAAAGGGAT TCGAAGCAAT TCACCTTTTT GGAGGTCAAT
GATGGCTCGT GCCTGAAAAA TATCCAGGTC ATCGTGGACA GCGATGTCCC GAGTTATTCG
GAGTTGGAAG GCATCAACAC CGGGGCTTCC GTCCGTCTCC GGGGCAAACT GGTCGAATCA
CCCGGCAAGG GGCAGAAATG GGAGGTCCAG GCCACTGAAA TTGCCCTGAT CGGCGCAGCG
GACCCAGAAG GATACCCTTT GCAAAAGAAA CGCCATTCCG ACGAGTTCCT GCGGACCATC
GCCCAGTTGC GCCCCCGGAC CAATAAATAC GGGGCGCTGT ACCGTATTCG GGCCGAACTC
GCTCAGGCCA TTCACCGCTT TTTCCATGAA CGAGGTTTTT ACTACGTCCA CACGCCAATT
ATTACCGGTT CTGATTGCGA AGGGGCTGGA GAGATGTTCC AGGTGACCTC CCTGGACATG
AACACGCCGC CGCGTGCAAA CGGCCAAGTC GACCATAGCC AGGATTTTTT CGGGCAATCA
GCCATGCTGA CGGTTTCTGG CCAGTTGTCT GCCGAAGTGT TGGCCTGTTC GCTAGGCAAT
GTGTATACTT TTGGGCCGAC TTTCCGGGCC GAAAATTCAA ATACACCACG CCATGCCGCG
GAATTCTGGA TGGTCGAGCC GGAGATGGCC TTTGCCGACC TCAAAGACGA CATCGATCTC
GCCGAGGCCT TTCTCCAATA TCTCGTGACC CATATCCGGG AGCACTGTTC CGAGGATCTG
GACCTCTTTA CCCGCTTTGT GGACAAGGAA TTGTCGGCTA CGCTGGATAA TATCGCGGAA
AACGCCTTTG TCCGTCTGCC GTACCGTGAA GCGGTGGAGA TCCTGCAAAA AGCCCGGCCC
AAGCAGGCCT TTGAGTACGA GCCCACCTTC GGCGAGGATC TGCAGACCGA GCACGAGCGG
TACTTGACCG AAACCCATTT CCAAAAACCG GTTGTGGTCT ACGATTACCC GAAATCCATC
AAGCCGTTTT ACATGCGGGT CAATGATGAC CAGGAGACTG TGGCGGCCAT GGATGTCCTC
GTGCCGCGGG TCGGAGAGAT TATTGGCGGC AGCCAGCGTG AAGAGCGGCT GGAGGTCCTC
GAGGGCCGGA TCGCGGATAT GGGCCTGCCC CGTGAGGAAT ATGAATGGTA TCTTGATCTC
AGGCGCTACG GGACAGTGCC CCATGCCGGG TTTGGGATGG GCTTCGAGCG GGTGCTCATG
TTCCTGACAG GAGTGGGCAA TATCAGGGAC GCGGTCCCTT TTCCCCGGAC CCCCGGGCAT
CTCCATTTCT AG
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| Protein sequence | MERTRVVQAL RSTAPVDDIQ IMGWVRTKRD SKQFTFLEVN DGSCLKNIQV IVDSDVPSYS
ELEGINTGAS VRLRGKLVES PGKGQKWEVQ ATEIALIGAA DPEGYPLQKK RHSDEFLRTI
AQLRPRTNKY GALYRIRAEL AQAIHRFFHE RGFYYVHTPI ITGSDCEGAG EMFQVTSLDM
NTPPRANGQV DHSQDFFGQS AMLTVSGQLS AEVLACSLGN VYTFGPTFRA ENSNTPRHAA
EFWMVEPEMA FADLKDDIDL AEAFLQYLVT HIREHCSEDL DLFTRFVDKE LSATLDNIAE
NAFVRLPYRE AVEILQKARP KQAFEYEPTF GEDLQTEHER YLTETHFQKP VVVYDYPKSI
KPFYMRVNDD QETVAAMDVL VPRVGEIIGG SQREERLEVL EGRIADMGLP REEYEWYLDL
RRYGTVPHAG FGMGFERVLM FLTGVGNIRD AVPFPRTPGH LHF
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