Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1716 |
Symbol | |
ID | 8419547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1971111 |
End bp | 1971842 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645038290 |
Product | parB-like partition protein |
Protein accession | YP_003198578 |
Protein GI | 258405836 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000788777 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.421921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCGT CAGAGTATAT CCACGGACAA TTATACCACA TCCCGGTCAA CGATCTCCAT TTCGATCCCA ACCAGTCAAC GGTCGAGATC AATGAAGAGG TGATTCTCGA CAAGCTCACC CGCCTGATCA AAGAACACGG TTTCTTCCAA CCGGTCTTTT TCCGCAAGAC CCCAGAGGGG CAACTCCAGC TCATTTTGGG CGGGCGGCGT CTGATGGCTG CGAAACAAGC CGGATGGGAT GTCATCCCAG CTATTTACTG TGCCCAAAAA TATTGTGAGG TCACTTTTAT AAAAAATCTT CTGTTGCAGG ACCTCACTCC GATCGAACGC GCCGAAGCCT ATCAGCAAGC CGTCGCCTAC CAATTCACAA AGAACCAGCT CGCCGAAATC TTCCAGTCCT CCCCGGAGGA AATAGATGCC TACCTGGCAC TGAACAAACT CCCCGAAGCC ATAAAAGATG GATGCCGCTA CAGTAGCCAG TATCGGTTGG AAGACTTGCA CCGCCTTGTC GGCATGCAGG ACGAACTCCA ATGGGACGCC TGGAAACGGT TGTGTAGCCA AGAGAGTGTG TGCGAGACCT CGACGATGCT GGAAGATTGC ATCCAGGGCT GCCACCATCT GGCCACTCTT TTGGGCTGCG CTGGGGAGTC ACTATCCCCG GAAAAACTCC AGACCTTAAA ACCGTATCTT CAGCAACTCC GCCAGCGCAT CGACGAAGTG CAAAATAGTT GA
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Protein sequence | MAPSEYIHGQ LYHIPVNDLH FDPNQSTVEI NEEVILDKLT RLIKEHGFFQ PVFFRKTPEG QLQLILGGRR LMAAKQAGWD VIPAIYCAQK YCEVTFIKNL LLQDLTPIER AEAYQQAVAY QFTKNQLAEI FQSSPEEIDA YLALNKLPEA IKDGCRYSSQ YRLEDLHRLV GMQDELQWDA WKRLCSQESV CETSTMLEDC IQGCHHLATL LGCAGESLSP EKLQTLKPYL QQLRQRIDEV QNS
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