Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1715 |
Symbol | |
ID | 8419546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1970492 |
End bp | 1970977 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645038289 |
Product | hypothetical protein |
Protein accession | YP_003198577 |
Protein GI | 258405835 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00029214 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.27707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTA AATTCAAATC CGCTTTGAAA GATGTCACCG ACATCTGTAA ATTTGAGACA TGGTTGCGTT TTTATTTCAC ACAGGAATCA GGTGAGGACT TGGTTATTGA GATTCCTGAG CAATCCATGC AGCACATCTC TGAAAACTAT CCATTTCTGG CCCAACTTGC CGAAACATAT AATAATAAGC CGATCACCCC GGAAAGCGCC CAGCGGGACA CCGTGGAATT CATCTATACC CAGCTTGATG GACAGCACCA TGAAATGGGA GCGGTGGCGC AGGTCCTGAA CAGCAAAAGC TTTGAAAACG AAATCAGCGT CTTCAACCTC TGGGTCCAGG CCCACGAAGA GCAGCTCGAC CAGAGCGTTA TGGACTTTGT GGACTGGATG CAATTGTTCG AGGCCTGGAA ACGGACCGAA AAAGGACAGA GCATCCTCTC TGGGCACACC AGCGGGACAA ATGCTGCTAC GCAGACGACG CAATAA
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Protein sequence | MASKFKSALK DVTDICKFET WLRFYFTQES GEDLVIEIPE QSMQHISENY PFLAQLAETY NNKPITPESA QRDTVEFIYT QLDGQHHEMG AVAQVLNSKS FENEISVFNL WVQAHEEQLD QSVMDFVDWM QLFEAWKRTE KGQSILSGHT SGTNAATQTT Q
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