Gene Dret_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1710 
Symbol 
ID8419541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1967208 
End bp1967933 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content60% 
IMG OID645038284 
Productmetallophosphoesterase 
Protein accessionYP_003198572 
Protein GI258405830 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0540724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.136885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTGG CGATACTTTC TGATATTCAT GCGAATTGGG CGGCTCTGCA GGCGGTGTGG 
CAAGACCTGG AGGAACAGGG TGTCGACAGC GTCTATTCCC TGGGCGATAA TGTGGGCTAC
GGTCCCAGTC CCCAGGAGGT GGTCGCCTTT TTACACAACC ATAATGTCCC ATCGGTGCAG
GGAAACCATG AGCGCGGCCT GACCAACCCC GCCTCACGCG CCTGGTTTAA TCCCCACGCC
AGACAAGCCT TGGAGCAGAC CCGGGCGCTT ATGGATCCGC AATGGATAAC GGTATTGAGC
CATTATCCGC TGTATCGCGT GGTCCAGGGG GCCAGGCTCG TTCACGGTGC GCCCCCGGAT
TCTGCGCACA CGTATCTGTT CGAATGGGAC GACGGGGAGC TTCCGGAGTT ATTTACCCGG
TTTTCCGAGA CGCTGTGCTT TGTCGGGCAT ACCCATGAAC TGATGCTCGT ATGTCTGGAA
AGCGGACGCG CCCGGCGGGA CGTTTTGCGG CGCGGGGTAT TTGCCCTTGA AGCCGGGTCC
CGCTATGTGG TGAACGTCGG CAGTGTGGGG CAGCCCCGCG ACGGAGACAA CCGGGCCAAG
TATGTGATTT GGGATACCGA GCAGGCCAGT CTCGAGGTGC GCTTTGTGGC CTATGACATC
CAGGATACTG TCGATCGTAT TGGGGCGTGT GGGTTGCCCC GGGCGAACGC CACACGGTTG
TGGTAA
 
Protein sequence
MRLAILSDIH ANWAALQAVW QDLEEQGVDS VYSLGDNVGY GPSPQEVVAF LHNHNVPSVQ 
GNHERGLTNP ASRAWFNPHA RQALEQTRAL MDPQWITVLS HYPLYRVVQG ARLVHGAPPD
SAHTYLFEWD DGELPELFTR FSETLCFVGH THELMLVCLE SGRARRDVLR RGVFALEAGS
RYVVNVGSVG QPRDGDNRAK YVIWDTEQAS LEVRFVAYDI QDTVDRIGAC GLPRANATRL
W