Gene Dret_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1703 
Symbol 
ID8419534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1960136 
End bp1960582 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content54% 
IMG OID645038277 
ProductCBS domain containing membrane protein 
Protein accessionYP_003198565 
Protein GI258405823 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.311156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0624027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAG TTGCTGACAT CATGACCACG AACGTGATCA CTGTTCAAAA AGATACCCCC 
ATTGGCGAAG CCGCTAAAAA ATTGCTCGAA AACCATATCA ACGGCGTGCC CGTCGTTGAC
GATGAAGGTC GACTGGTGGG GATTTTGTGC CAAAGCGACT TGATCACGCA GCAGAAAAAC
TTCCCCCTGC CAACGGTATT CACCATACTC GACGGGTTTA TCCCCTTGAG TTCCATGGGC
CAGATGGAAA AGCAGGTCCA AAAAATAGCC GCCACCACCG TCGAGCAGGC CATGACGCCC
GATCCGATCA CGGTCACGGC TGATACGGAT CTCAATCAGG CCGCCTCCCT GATGGTCGAC
AAAAATTTCC ACACCCTGCC CGTGGTCGAC GGCGAAACCC TCGTCGGCGT CCTCGGCAAG
GAAGACGTTT TGAAGACCTT GCTGTAA
 
Protein sequence
MPTVADIMTT NVITVQKDTP IGEAAKKLLE NHINGVPVVD DEGRLVGILC QSDLITQQKN 
FPLPTVFTIL DGFIPLSSMG QMEKQVQKIA ATTVEQAMTP DPITVTADTD LNQAASLMVD
KNFHTLPVVD GETLVGVLGK EDVLKTLL