| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1698 |
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| Symbol | |
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| ID | 8419529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1955392 |
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| End bp | 1956291 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645038272 |
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| Product | hypothetical protein |
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| Protein accession | YP_003198560 |
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| Protein GI | 258405818 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.121021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00778912 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAA AAGGTTTTTC TCTTATTGAG ATGCTGGTTT CTATGTTTTG TGTCGTGATT
ATTATGGTTT CGGTTTATGA TGTTTTTTCA AGGCAGTCCG GGATAAATAC TGTAGAGCAA
GGCATATTGG ATTTACAGCT TAATAGTCGC ATCGCTATCG ATAGATTGGA TTTTTTGTTT
TCTCATGCGG GGTTTGGGTG CGCTGATTCT TTTGCGGACG GAGATAGTTT ACAGGGTGAG
GATGATGTTG GGGACTCTGT TGTTATTGAG AATGCTATCA GTACGATCGT CGATTCCAAT
GCATCAGCAG GATCAGACTC CGTTGTCGTA AGCTATGGAT TCCAAAAGGT GGGTGAAATT
GAAGATATGC CTTCCTCGAC CCAAATAAAT GTGGAAAATG AAAAGGGTCC TTCTGTAGAC
GAAAATGCAA ATTTTAAAAA TTATATTTCC TTCTATCCGG ATATAGCAGG AAACGTTTTT
TATGAAGTCG GTGGCTCATC AGAGCCTTTT TCTGTGGATA GGAGCTTGGA TACCATAGCT
AAAAATGGGA CTGTAAGTAT ATATATGGTT GGCCCTGTAA AAGTTTTTCT GGAAAATAGC
GTTTTGCAAT TTCGAAATTA TGCATACAAC AGTACTGCAT GGAATGCCAC AGAGCATGTG
GAAAGAATTC AGTTTGAGTA TAGCACTGAT GGGCAGTCAT GGGAATCGAG TCCTACCGAT
TTAGAAGATA TACAAGCTGT TCGTGTTTTT CTTCTAAGTC GTTCGTCACG AAAGGATCCA
GGGTATACCG ACACCAAGAC CTACGATATG GGGGATGCGA CGGTTGGGCC ATTCAATGAC
CAGTATCATA GAGATTTAGC CAGGAAAACC ATATGGATTC GCAGTCAGTT AGAAGACTAG
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| Protein sequence | MSEKGFSLIE MLVSMFCVVI IMVSVYDVFS RQSGINTVEQ GILDLQLNSR IAIDRLDFLF
SHAGFGCADS FADGDSLQGE DDVGDSVVIE NAISTIVDSN ASAGSDSVVV SYGFQKVGEI
EDMPSSTQIN VENEKGPSVD ENANFKNYIS FYPDIAGNVF YEVGGSSEPF SVDRSLDTIA
KNGTVSIYMV GPVKVFLENS VLQFRNYAYN STAWNATEHV ERIQFEYSTD GQSWESSPTD
LEDIQAVRVF LLSRSSRKDP GYTDTKTYDM GDATVGPFND QYHRDLARKT IWIRSQLED
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