| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1697 |
|---|
| Symbol | |
|---|
| ID | 8419528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1955003 |
|---|
| End bp | 1955419 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645038271 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003198559 |
|---|
| Protein GI | 258405817 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.123026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00650973 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCGC AGTCAGTTAG AAGACTAGAT CGTGGCGCCG GGTTTACATT GTTAGAGGTG
TTGGTCGCCA TCGTGATTCT GTCCGTAGGT ATTATGGCCT GGGCCCTGGC GCAAAATCAG
CACATTCAGG GGCGTGCGTT GAGTGGCGGA CTGACCAAAG CGACGGAACT GACCCAGTCT
GTTCTCGAGG CGAATGCCAC AGAGGTTGCC GGCTGGGATG CGAGCCGTTC CAGCACCAAC
GGAACCGTAC AGTATACATT CGCCAACCTC ACCTTCACAA CGTTTTGGGA GGTGATTGAA
GGGTCTGCTC CCTTCGGGAG CGCGAATCTT TCGACATGGC AGGTTCACTG TGAAACGACA
TGGACGCAAT ACGGGGAGCA CCGGGTTGCA ATGGAACGCT TGGTGGTGGG GCAATGA
|
|---|
| Protein sequence | MDSQSVRRLD RGAGFTLLEV LVAIVILSVG IMAWALAQNQ HIQGRALSGG LTKATELTQS
VLEANATEVA GWDASRSSTN GTVQYTFANL TFTTFWEVIE GSAPFGSANL STWQVHCETT
WTQYGEHRVA MERLVVGQ
|
|---|
| |