| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1688 |
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| Symbol | |
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| ID | 8419519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1940937 |
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| End bp | 1941695 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038262 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_003198550 |
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| Protein GI | 258405808 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0524838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAG AATTTACTGA ACCTGTCGTG GTTCTCCATG TTGGGCTGTT CCGGGAAGCG
GATTGCTGGG TACGCCTCTT GTCGCCCTCG AAAGGCGTGG TCACGGGATT TGCTTTCGGC
GGTATGCGCA GTCGTCGGCG GTTCTGCGGC TGTCTGGACG CGGTGAGCAA GGTCCAGTTC
CGTTTTCAGC GCAGCAAGCG CGGCGAATAT TTGACCCTCT GCGAGGGAGC GCTTTTAGAC
CGTTTCACAG GCGTGCGGCA ACGCCCCGGG CGTTTGGGGA TGGCGGTCAA CTGCCTCAAA
TTTGTTGAAG CGGTGCAACT GGGAGAGCAT GGGGCACCGG AAATTTTTGC GCTGTTGACG
CAGACATTGC AACTCCTGGA CGAAACTCCC GCCTTGGAGC CCGTGGTGCC GCTTTTTTTC
CGGGCCAGGG TCGCTTTCGA GCATGGCTAC CAGCCTGAGC TCGACCAGTG TCTGCTCTGC
GGCTGCGATT TGGAGCCCGG GCGCAACGCT TCCTTTGTCC TGGAACGCGG CGGCCTCGTT
TGCGGGGCCT GTCAGGGCCG AGCTCCCGGT CCGCTGGCGG CACTGGAGCG TGGACAATGG
GAACTGTTGC GGCGGGTGCT GCTCGCTCCG CCTGAGCAAT GGCCCGTTTT TCCCGAGCGT
GCCGATCAGG TGGTCCAGGC CACTGCGCGA CTGCTCGACC AATATGTCCA ATACCACTTG
GGCGTTCAAT GGGACGGCAA TCGCTTTGTC CGCAGTTGA
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| Protein sequence | MSEEFTEPVV VLHVGLFREA DCWVRLLSPS KGVVTGFAFG GMRSRRRFCG CLDAVSKVQF
RFQRSKRGEY LTLCEGALLD RFTGVRQRPG RLGMAVNCLK FVEAVQLGEH GAPEIFALLT
QTLQLLDETP ALEPVVPLFF RARVAFEHGY QPELDQCLLC GCDLEPGRNA SFVLERGGLV
CGACQGRAPG PLAALERGQW ELLRRVLLAP PEQWPVFPER ADQVVQATAR LLDQYVQYHL
GVQWDGNRFV RS
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