| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1686 |
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| Symbol | |
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| ID | 8419517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1937713 |
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| End bp | 1939803 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038260 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_003198548 |
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| Protein GI | 258405806 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.78284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0276337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT TTGTTTTTGA AATCGGTACG GAAGAAATAC CGGCGCGGTT TTTACCGCGC
CTGCGCGACC AACTCGTGGA AACCACCGGG CGCCTTTTGC AGGAGCAGGA ACTCTCCGCA
GAGGTGACGA GCTATGCCAC ACCGCGGCGG CTTGTGGTCT ATGCGTCCCA ATTGCCCGCC
AAACAGCCTG TTCGTGAAGA ACTCGTCACC GGTCCGCCGG TGGCTATCGC CTACGACGAC
AACGGAGAAC CGACCAAGGC GGCGCAAGGG TTTGCCAAAA GCCAAGGGGT GGAGGTGGAC
GCCCTGTTCA GCGAACAGAC CGAGCGCGGC GCTTACCTTG CTGTGCGCAA GACCGTGGGG
GGCAATGATG CGCGGGAGCT GTTGCCCCAG TTGTGCCAGG AACTCCTCGC TGCCTTGTCG
TTTCCCAAAA GTATGCGCTG GGAGGCCTCC CAGGCGACTT TCGCCCGCCC TGTGCGCTGG
CTGCTGGCGT TGCTGGACAG TGAGATCGTG CCCGTGGAGG CCGTTTCCCT CACAGCCGGA
CGGCAAACTT TCGGACACCG GACGATGGGA GCCGGCCCCT GGGAGGTGCC TGAGGCCGCT
TCCTATTTCG AGATCCTTCG CGACAAGGGG CGGGTTATTC TCGACGTGGC CGAGCGTACG
CGCCGGATTC GGGAGGAGGC GGAAGCGCAG GCCTCAGCCC ACGGCGGTCG GGTGGCCTGG
GATGAAAGCC TGTTGGGGGA GGTCGCCGAC CTGGTGGAAT GGCCCCAGGC CGTATTGGGG
GGATTCGACG CCAGTTTCCT GGAGTTGCCC CGGGCCGTGC TCCTGACCAG TATGCAATCG
CACCAGAAAA GTTTCGGGGT CGAGAACGAC GCCGGGGAAC TCTTGCCGTA CTTCGTGTGC
ACCTTGAACC TTGTGCCCCA GGACCTGGAT CTGGTGCGCA AGGGTTGGGA GCGTGTCCTG
CGGGCCCGGC TGGAAGACGC CAGATTCTTT TGGCAGGTCG ACGGCAAGGC CAGCCTGACG
ACTTGGCTGG ACCAACTGGA CAAGGTTATT TTTCTGGGGC CGCTTGGCAG CATGGGCGAC
AAGGCCCGGC GCCTGGAGGG GCTCGCCGGA GAGATGGCCG CCCGCGTCGC CCCGGAGGCG
GCAGATTCCG CACAGCGGGC CGGACGATTG GCCAAGACCG ACCTGGTCAG TGAAATGGTT
GGGGAGTTCG CCGAACTGCA AGGGTTCATG GGCGGGGTGT ATAGCCGTCA GAAAGGGGAA
ACCGCCTCTG TGGCCCAGGC CGTGGCCGAA CACTATCTGC CCACCGGACC GGAGAGTGCG
GTCCCGTCAA ACGCGGAAGG GGCGGTGGTC GCTCTGGCCG ACAAGGCCGA TACCCTTGTC
GGATGTTTCG GGCTGGATAT GGTCCCTTCC GGGGCCAATG ACCCGTACGC CCTGCGCCGT
CAGGCCCTGG GCATCATCCG GATTTTGCTC GAATACGGCT GGCGCTTGTC CCTGCGCGAT
CTCCTGAGTT GGGCCCAGCA GGCCTACGCC AAGGATGTGC AGTGGAAAAG CGAACCTGGT
GTCGCCTTAG AGACCCTGGA GACGTTTTTC GGTCATCGCC TCAAAGCGTA TTTTCAGGGC
CGCGGCTACG GTACGAAAAT TGTGGATGCC GCCTTGGGAG CGGGATGGGA CGATGTGCCC
GCCCTGGCCC AACGTCTCGA TGCCCTGCAC GGTTTTGCGG CCGAGGAGGA TTTTGAACAG
GCGGTGCTGA CCTTCAAACG GGCCGACAAT ATTATCCGCA AGCAGGGCAC ACAGATCGAT
GGCGACCTGG ACGGAGGGTA CAGCGCAACC GCGTTGCAAG AAGAGCAGGA AAAGACTCTG
GCCGCGGCCC TGGAGGACCT GGCGCCGCGA TGGGCCGCGC TGTGGGAGCA GGAGGCCTTT
GACGATCTTT TTGGCCTGCT GCGGGAATTG CGCCCGGCCG TGGACGGTTT TTTCGATCAT
GTCATGGTCA TGTGTGATGA TCCTGAGCTG CGACACAACC GGTTGAATCT GCTCAAGGCG
TTGACCGACC GGTTGTCTTT GCTGGCCGAC TTCAGCAAGC TTCAAGTCTA A
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| Protein sequence | MPDFVFEIGT EEIPARFLPR LRDQLVETTG RLLQEQELSA EVTSYATPRR LVVYASQLPA
KQPVREELVT GPPVAIAYDD NGEPTKAAQG FAKSQGVEVD ALFSEQTERG AYLAVRKTVG
GNDARELLPQ LCQELLAALS FPKSMRWEAS QATFARPVRW LLALLDSEIV PVEAVSLTAG
RQTFGHRTMG AGPWEVPEAA SYFEILRDKG RVILDVAERT RRIREEAEAQ ASAHGGRVAW
DESLLGEVAD LVEWPQAVLG GFDASFLELP RAVLLTSMQS HQKSFGVEND AGELLPYFVC
TLNLVPQDLD LVRKGWERVL RARLEDARFF WQVDGKASLT TWLDQLDKVI FLGPLGSMGD
KARRLEGLAG EMAARVAPEA ADSAQRAGRL AKTDLVSEMV GEFAELQGFM GGVYSRQKGE
TASVAQAVAE HYLPTGPESA VPSNAEGAVV ALADKADTLV GCFGLDMVPS GANDPYALRR
QALGIIRILL EYGWRLSLRD LLSWAQQAYA KDVQWKSEPG VALETLETFF GHRLKAYFQG
RGYGTKIVDA ALGAGWDDVP ALAQRLDALH GFAAEEDFEQ AVLTFKRADN IIRKQGTQID
GDLDGGYSAT ALQEEQEKTL AAALEDLAPR WAALWEQEAF DDLFGLLREL RPAVDGFFDH
VMVMCDDPEL RHNRLNLLKA LTDRLSLLAD FSKLQV
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