| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1685 |
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| Symbol | rpsT |
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| ID | 8419516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1937215 |
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| End bp | 1937478 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038259 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_003198547 |
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| Protein GI | 258405805 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.462249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0272644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTAACC ATCGTTCAGC TCTTAAGCGG CATAAACAGA GCCTGATCCG GCGTGACAGA
AACCGGGCCG TGAAGACCCG TGTCAAGAAC GCATTGAAGA CCGTGTATTC CGCTGTGGAA
AACGGGGACA AAGGTCAGGC GGAAGAGGCC TTGAAGCAGG CGTCTTCGGT GTTGGACCGC
GCTGCCACCA AGCGGGTCAT CCATTGGCGT AATGCGTCCC GCCATATATC CCGGTTGACG
AAAAAGGTGA ACGCCCTCGG CTAG
|
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| Protein sequence | MANHRSALKR HKQSLIRRDR NRAVKTRVKN ALKTVYSAVE NGDKGQAEEA LKQASSVLDR
AATKRVIHWR NASRHISRLT KKVNALG
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