| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1680 |
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| Symbol | |
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| ID | 8419511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1932512 |
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| End bp | 1933846 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038254 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_003198542 |
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| Protein GI | 258405800 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.990278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.232979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTTTT TCTCTAAGAT ATCAAAAATT TGGCGTAAAA ATGACCAGGA AGCCGCCCCC
GGAGTTGAAG AACATGCTCT CGGGCAGGAG CACAAACCAA CACCGGGTCC CGTTGAGCAG
GGGCAAATGG AACAAGCGCC CTGGCAGACC GAGCTGCTCC AGGCCCTGCA GGAAGCCGAA
CCCCGTCTCA GTGTCTGGCT CGACCACATT CTGGCCGGTA TCAGCTCAGC CAGTCCCGAA
CTCTGGCAAC GCCTGGCCTT CCTCCTGGAC AATCTGGAAG TCCCCAAAGA CGAAGCCGCG
GCCTTCATCC AGGACTTTCG GAACTGGCTG GACGAGATGG AATACGAGCG GGTTGAGGAA
TTCCGCTCCG AACTCCAGTA CCGTTTGGCT CTGGCGCTCG ACTTGGAAGA CGAAGAAGAC
GAGCGCAGCC GGCTGTTTAT CAAGCTCTCC AGCGGATTGA CCAAGACCAA AGAACAGTTG
TCCAAACAGG TCGATCAACT TTTACAGCTC AACAAACAAT TCGACGACGC CTTCTGGGAG
GACCTCGAAG AGATCCTGAT CATGTCCGAT GTCGGCTTCA AAGCGACCAC GACCCTGCTC
GAACGCCTCC GGGACCGGGT CCGCCAGGAA GGATGCAACG ACAGCGAGAC CTTCAAGACC
TTGTTCAAGG AAGAATTGGC CGCGTTGTTT CCCCAGCCCG CCAAGCGCAT CAAACCACAG
CCTCCGGAGG TCGTCTTGAT GATCGGCGTC AACGGCGTGG GCAAGACGAC GACCATCGCC
AAACTGGCCC ACCGCGCCCA TATGCAGGGA CAAAAGGTCA TGGTCGCCGC CGGAGACACC
TTTCGCGCCG CAGCCATCGA ACAGCTCGAG ATCTGGTCCA AACGGGTCGG AGCCGGTTTT
TATGCCAAAG CCCCGTTTTC CGATCCGGCC TCCGTGGCTT ACGAGGCCTT GGATACGGCC
CAGGCCGAAG GCTATGACAC CCTTTTTGTC GACACCGCCG GACGGTTGCA CACCAATGTC
GACCTCATGG AAGAGCTGCG CAAAATCAAG CGGGTCCTGG CCAAGAAACA CCCCGGTGCC
CCGCACCGCA CCATTTTGGT CCTGGACGCC ACCACCGGCC AGAACGCCCT GTCGCAGACC
AAACTGTTCG CCAAGGACAT GGACATCGAC GAAATCGTGC TGACCAAGCT CGACGGCACT
GCCAAAGGCG GCGTGGTGGT CGCCGTCTCC CTGGAATATG GAATCCCCAT CACTTTTATC
GGACTCGGCG AAAAAATGGA GGACCTGCGC CCCTTTTCCG GGACCGACTT CGCCCAGGCC
CTTCTCGATC TCTAA
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| Protein sequence | MGFFSKISKI WRKNDQEAAP GVEEHALGQE HKPTPGPVEQ GQMEQAPWQT ELLQALQEAE
PRLSVWLDHI LAGISSASPE LWQRLAFLLD NLEVPKDEAA AFIQDFRNWL DEMEYERVEE
FRSELQYRLA LALDLEDEED ERSRLFIKLS SGLTKTKEQL SKQVDQLLQL NKQFDDAFWE
DLEEILIMSD VGFKATTTLL ERLRDRVRQE GCNDSETFKT LFKEELAALF PQPAKRIKPQ
PPEVVLMIGV NGVGKTTTIA KLAHRAHMQG QKVMVAAGDT FRAAAIEQLE IWSKRVGAGF
YAKAPFSDPA SVAYEALDTA QAEGYDTLFV DTAGRLHTNV DLMEELRKIK RVLAKKHPGA
PHRTILVLDA TTGQNALSQT KLFAKDMDID EIVLTKLDGT AKGGVVVAVS LEYGIPITFI
GLGEKMEDLR PFSGTDFAQA LLDL
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