Gene Dret_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1676 
Symbol 
ID8419507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1927767 
End bp1928327 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content62% 
IMG OID645038250 
Productmethyltransferase 
Protein accessionYP_003198538 
Protein GI258405796 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAA TCAGCGGGAT ATATAAGGGG CGGCAGATCG CGACCACGTC GGGGCCCGGA 
TATCGGCCGG CGACGCTCAA GGTCCGTGAA GCGCTGTTTT CCATGCTCGA AGCCCGCGGC
GTGACCTGGC CGGAGGCCCG GGTACTGGAT CTTTTTGCCG GTAGCGGCAG CCTCGCTTTT
GAAGCATTGA GCCGCGGGGC GGCAACGGCC TGCGTGGTGG AGAAAAACCG GCGCGCTGCC
GGCAGCATCA GCAAGACCGC CCGTTCTCTC GGCCTGGACC GGGGCCAGTT TCAGGTGGTC
ACCGGCGATG TCCAGCGTTT CCTGCACCGT CCGGTCACGA CACGGTATGA CGTCGTCTTT
GTTGACCCCC CTTACGGTCA GGGGGTATTG CTCCCTGCGC TTGAAACATT GACCTCGAGC
GGGTGGCTGG CCCCTGAGGC GTTTGTGGTT GCTGAGGTTG AGGCCCAGCT GAATCCCGGC
CCAAACACCC CGGCCGGACT TGTGATGGAA GTGGATAGGT TGTACGGTCA AACAAGGATT
TGCATATGGC AGGCACAATA G
 
Protein sequence
MRIISGIYKG RQIATTSGPG YRPATLKVRE ALFSMLEARG VTWPEARVLD LFAGSGSLAF 
EALSRGAATA CVVEKNRRAA GSISKTARSL GLDRGQFQVV TGDVQRFLHR PVTTRYDVVF
VDPPYGQGVL LPALETLTSS GWLAPEAFVV AEVEAQLNPG PNTPAGLVME VDRLYGQTRI
CIWQAQ