| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1674 |
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| Symbol | |
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| ID | 8419505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1926310 |
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| End bp | 1927254 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038248 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_003198536 |
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| Protein GI | 258405794 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATGG TTGACAGACC GGAGCCACCA CCGATTGTGT GTGTTGTCGG CCCTACGGGG
ACCGGAAAGA ACCGGCTTGC CCTGCATTTG GCCCAGTCCC TGGATATCGC GATTGTCAAT
GCCGATTCCC GCCAAGTGTA TCGGGATTTT CCTGTCGTTA CCGCCCAGCC TGATGCCCAG
GAGCAGTCGG TGTGCCCCCA TTATCTGTAC GGATTTCTCC CGACCTCGGA CAAGGTCGAT
GCCGGGTCGT TCGTGCGCAT GGCCCGGGAG GTCATTGCCG AGGTCCTCGA CAACGGCCGT
CTGCCAGTGT TGGTCGGAGG AACTGGGCTG TATTTGCGGG CCCTGGTCCA CGGTTTGGCA
CCGACCCCTC CCATACCCGA GTCCATTCGC AAAAAAGTTG CTTCTGTGGT CAGGCATCGA
GGGCGGCAAT GGGCCCATCG GGTCCTGAGC CGGCTTGATC CCGAGTGGGC GGCCAAAGTC
CATCCCAACG ACCGGCAACG GGTGACCCGG GGGCTTGAGG TCCGTCTGGC CACAGGGACG
CCGTTGAGCC AATGGCATCG GCAACAGACT CGAACCCCGC GCTACAATGC CTTGACTTTG
GGGTTGGATA CGGATTTGGC CGCTTTGACC CCGCGGCTGG AAAGCCGCAT CCGGCGTATG
CTTGACGCCG GGGCCGAGGA TGAGGCGCAC CGGGCCTGGG CCCGTTGTCC CGACCCCGAC
GCTCCGGGGT GGACAGGAAT CGGCTGCGCC GAACTGCTGG CCATGATCCG CGGCCAGTTG
TCCCGTGAAG AGGCCTGCCG GCTCTGGTTG CAGAACACCC GCGCCTATGC CAAGCGTCAG
ATGACGTGGT TCAGGAAGGA GTCCGAGGTC TTCTGGGTCC AGCCCGACGC CAGGCAATGG
CCTTTGGAAT TGGTCAGCGA TTGGCTGCAA TCGGCCCGGG GTTGA
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| Protein sequence | MTMVDRPEPP PIVCVVGPTG TGKNRLALHL AQSLDIAIVN ADSRQVYRDF PVVTAQPDAQ
EQSVCPHYLY GFLPTSDKVD AGSFVRMARE VIAEVLDNGR LPVLVGGTGL YLRALVHGLA
PTPPIPESIR KKVASVVRHR GRQWAHRVLS RLDPEWAAKV HPNDRQRVTR GLEVRLATGT
PLSQWHRQQT RTPRYNALTL GLDTDLAALT PRLESRIRRM LDAGAEDEAH RAWARCPDPD
APGWTGIGCA ELLAMIRGQL SREEACRLWL QNTRAYAKRQ MTWFRKESEV FWVQPDARQW
PLELVSDWLQ SARG
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