Gene Dret_1668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1668 
Symbol 
ID8419499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1920951 
End bp1921517 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID645038242 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003198530 
Protein GI258405788 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.580406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA GCAAAGTAGG CAAGCGGATC CGTTCTTTTC GAGAAGAACA GGAATTGACA 
TTAGATGATG TGGCCGAACG CACCGGCCTT GAAGTCGCCT TTTTGCAGGC CCTGGAAGAG
GACGAGGTCT ATCCTTCCTT AGGGCCATTG CTGAAGGTCG CCCGAGCCCT GGGAACCCGG
CTGGGGACCT TTCTCGACGA TCAGATCAGC GAAGATCCGC TGATTGTACG TCAGACGGAG
CGTGCCGAGG AATTGAGCAT GCTCACGGGC AAGGACAAAC CGGTCAGCCT GCGCTTCCAC
TCCCTGGGCA AGGGCAAATC CGACCGGAAC ATGGAGCCCT TTTATGTGGA GATTTATCCC
GACTCCGAGC CGCAGAGCCT CTCGTCCCAC GAAGGGGAGG AATTCATTGT CGTGGTCAAA
GGAGAGGTGG AACTGGTCTA CGGTGAGAAT CGCTATGTCC TCGGGCCAGG TGATTCCATG
TACTACAACT CCATCGTTCC CCACCACGTT GGGGCGGCCG GAGATGAAAA AGCCGAGATC
TATGCTGTCT TGTATTTTCC GGAGTAA
 
Protein sequence
MAKSKVGKRI RSFREEQELT LDDVAERTGL EVAFLQALEE DEVYPSLGPL LKVARALGTR 
LGTFLDDQIS EDPLIVRQTE RAEELSMLTG KDKPVSLRFH SLGKGKSDRN MEPFYVEIYP
DSEPQSLSSH EGEEFIVVVK GEVELVYGEN RYVLGPGDSM YYNSIVPHHV GAAGDEKAEI
YAVLYFPE