Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1668 |
Symbol | |
ID | 8419499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1920951 |
End bp | 1921517 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038242 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003198530 |
Protein GI | 258405788 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.580406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGA GCAAAGTAGG CAAGCGGATC CGTTCTTTTC GAGAAGAACA GGAATTGACA TTAGATGATG TGGCCGAACG CACCGGCCTT GAAGTCGCCT TTTTGCAGGC CCTGGAAGAG GACGAGGTCT ATCCTTCCTT AGGGCCATTG CTGAAGGTCG CCCGAGCCCT GGGAACCCGG CTGGGGACCT TTCTCGACGA TCAGATCAGC GAAGATCCGC TGATTGTACG TCAGACGGAG CGTGCCGAGG AATTGAGCAT GCTCACGGGC AAGGACAAAC CGGTCAGCCT GCGCTTCCAC TCCCTGGGCA AGGGCAAATC CGACCGGAAC ATGGAGCCCT TTTATGTGGA GATTTATCCC GACTCCGAGC CGCAGAGCCT CTCGTCCCAC GAAGGGGAGG AATTCATTGT CGTGGTCAAA GGAGAGGTGG AACTGGTCTA CGGTGAGAAT CGCTATGTCC TCGGGCCAGG TGATTCCATG TACTACAACT CCATCGTTCC CCACCACGTT GGGGCGGCCG GAGATGAAAA AGCCGAGATC TATGCTGTCT TGTATTTTCC GGAGTAA
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Protein sequence | MAKSKVGKRI RSFREEQELT LDDVAERTGL EVAFLQALEE DEVYPSLGPL LKVARALGTR LGTFLDDQIS EDPLIVRQTE RAEELSMLTG KDKPVSLRFH SLGKGKSDRN MEPFYVEIYP DSEPQSLSSH EGEEFIVVVK GEVELVYGEN RYVLGPGDSM YYNSIVPHHV GAAGDEKAEI YAVLYFPE
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