| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1648 |
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| Symbol | |
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| ID | 8419479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1898304 |
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| End bp | 1901834 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038222 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_003198510 |
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| Protein GI | 258405768 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.883005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGTG AATCGTTTTT GCCGAATACA CCTGAGAAAC CGGTTCGATT GTATGCCGTT
CTCGGGCTGT GCGTGTTGGG CATTTGTATC GCTATTATTG TTACCTGGTC CACCGGCCGG
CGGATGACGG TCCATCACGC CCGGCTGGTG CACACGGCTA CGGAGATCAA GTTTCAAGTC
TCTCAGGCCC ATATCTGGCT GGAAGAGGGA CTTCTCGGTG ACCCGACGGT AGAGCGGGAC
ACGTTTATGA CCCATCTGGA CCAGGCCGAG GCCCTGGCGG TAGCCATGCT CGAAGGGGGA
ATGGGGGCCG GGGAGCCGTT GCGCCCGGTC CAGACTGCCG GACTCCGCCG GGAGATCCGT
TCCCTGAGGG GCTCGCTTGC GCAGTACCGT TCCCAGTCGC TGGAACGCTG GGCCCTCCGG
GAGCAGGGCA CGGCCCAGGT GGGGTCGCCG AGGGATCAGC GCCTCGACAG CGTCTATCAG
GAGGTCGTCG AGAGCAATCA GGCCATGATT GAGGCCTTGC ACAGCAAAAT ACGTTTTGAT
CTGGCCCAAT TCTATTGGAC GCTTTTCGGT ATTCTGGTGT TTGTCACCGT TTTGGCTGTA
TTGAGCTGGT ATTCTCTGCG CCGGTATATA GGCCAGCGCA ACCGGGCAAT TGCCTCTTTG
AGCCGAAGTG AGGAGGATCT GCGCACGACC TTGATGTCCA TCGGCGACGG CGTGATCAGC
ACGGACACGC AAGGGCGCGT TACCAGGATG AATGAGGTCG CCCAGCATTT GACCGCATGG
GACGAGAAAG AAGCGCTGGG ACGGCCGTTG GAAGAGGTGT TCGCTATTGC CAACGCCCTT
ACCGGCAAAG AGGTCGAAGC GCCGATCCAT CGGGTCCTGC GGGAGGGGAT GGTGGTCGGG
TTGGCCAACC ATACGGTCCT CACAGCCCGC GACGGGACCC GGCGTCAGAT TGCGGACAGT
GCTGCGCCCA TCCGCGTCTG TGACGGGGAA ATCACCGGAG TCGTCCTGGT CTTTCGTGAC
GTCACTGAGC AATACGAGCA GGAACGACGG GTTCAGGAAA GCGAAACCCG CTTCCGGGCC
CTCTTTGAAC TCATGGGCCA GGGAGTCGTC TTCCATGCAC CGGATGGCCG GATCGTTGAC
GCCAACCCCG CCGCGCAGCG CATCCTGGGG CTGACCCTTG ACCAGTTGCA AGCCCGCCGT
CCTTTCGATC CCAGTTGGAA GTGTGTGGAC AGTGACGGCC AAGATTTCCC GATGTCAGAG
CATCCGGCCA TGGAGGTCCT ACGGACCGGT GAGGCTGTGG CCGGTGTGGT CATTGGAGTG
TTTCACCCCG GCCGCCAGAA ATTTGTCTGG ATCCGCGTCA GCGCTGTGCC TCTTTTTTCC
AGAGACAGTG GAAAACCCCT CGAGGTCTTC GCCTCCTTTG AGGACATCAC GGAGCTTAAA
GAGGCCGAGG AGGCCCTGCG CTCCAGTGAG GCGGAGCTCC GGTATCTCTT TGACACCGCT
CCGGTGGGTA TTTTCCGGAC CACCTCCACG GGCCGGGTCC TCAAGGTCAA TCCGAAGATG
GCCGAGATCG TGGGCTGCGA CTCCCCGGAA CAGGCCTTGG AACGGTACCA GGATCTTTTT
GTTGATCTCT ATGCCGATTC TGAGCGGCGG AGTGTTTTTC TTGACCGCTT ACAGCGCGAG
GGCGAGATCC TGCAGTTCGA ATATGAAGGA TTTCGCCGCA ACGGCGCCCG GCGGTGGTTC
ATGATGAACG CCCGTTTGAG CGGCTATCTC GAGGATGGGA GTTTTCTCAT CGACGGCTTC
ACCTCAGACA TCACCGAGCG CCGGGAAGCC CAGGAGCGTA TCCAGCACCT CAACCTTGTC
TTGCGGGCCA TCAGGGAAGT AAACCAGCTC ATCACTCGTG AGAAGGACGC CGAACAACTC
CTGCGCAAGG CCAATCAACT CATGGTCGCC CACCGCGGCT ACAGCAGCGC TCTGGTCATC
CGGACCGACG CCAACGGGAG GCCCCAGACC TATTACCATG CCGGTGAGGA TAATTCGCCG
ATCTTCCAAC CGCTGGCAGA GCACATCGAG GCCGGCATGT TGCCGCCGTG TTGCCGGCTG
CTAGATTCCA AGACCGAGGT CCTGTTCGTC CCCAAGGCCG AGGGCGCCTG CGCGGGGTGT
CCCCAGGAAA ACACGTGCCA GACCTTTGAC ACCTTGTGCG TGGCCCTGCG CTATGCAGAC
CGCTTTTTCG GTTACATTGC CGTGGCCCTG CCCCAGGGAC GTGGCTATGA TCCTGAAGAA
CAGAATCTCT TTCAGGAAGC GGCCAACGAC GTCGCGTTTG CCCTGTATAC CATCGAACAG
GAAGCCCAGG TCAAGCAGGC CACGGCTGAA CGGGAACGCA TGGAAGATCA ACTCCAACAG
GCGCAGAAGA TGGAAGCGGT GGGACGGCTG GCAGGCGGGG TAGCCCACGA TTTCAACAAT
ATGCTCAACG TCATCCTCGG GTATACCGAC ACCTCGTTAT TGCAGATGGA TCGTGGCCAT
CCCCTGTATG AAGCCATGAC CCAGATCCAT CTGGCGGCAG AGCGCTCCGC AGACCTGACC
CGTCAACTCC TGGCTTTTTC CCGCAAGCAG ATTACCCAAC CGCAGGTGTT GAACCTGAAT
ACGCTTTTGG AGAATCAATC GAAGATGCTG GACCGCTTGA TCGGCGAGGA TGTCGAACTG
CAGTTTGTTC CGGCCACGTC GTTGTGGAAT GTGCGCCTCG ATCCCTCCCA ACTCGATCAG
ATTCTGGCCA ATCTCGTGGT CAACGCCCGG GACGCCATGC CCGAAGGCGG GACCATCACC
ATAGAGACCG GCAATGTCGT GCTGGACGAG GCCTACTCCA GCCGCCTGCT CTCCGTGGAG
GCCGGGGAAT ATGTGCTCCT GGCGGTCAGC GATAGCGGCA AGGGGCTGCC CCCGGAGATG
CAGGAGCAGA TTTTCGAACC CTTTTTCACC ACCAAGAGTA AAGGGGAGGG GACCGGCCTC
GGCTTGTCAA CGGTCTATGG TATCGTTCAG CAAAATCAGG GTTTTATTCA CTTGTATAGT
GAGATGGAAT CGGGAACGAC CTTCAAGATC TATTTGCCGC GGGTCATCGA AGAGGCTGTG
CAGCCGACCC AAGAGGAGGA TCACGGTCCT CTGACAGGCC GGGAAACGCT TCTGGTCGTC
GAGGATGAGG AGCAATTACT GGAGTTGATC GGGTCCGTGC TCGAAGAATA CGGTTACACC
GTGCTCGCCG CCGGAAGCCC GCAGCAGGCG ATGGACTTGG CTGCCAAGAC GAAGACGCCG
ATCGAGCTTA TGCTGACCGA CGTGGTCATG CCGGGAATGA ACGGCAAGAT GCTGCGCGCC
CGGATTCAGG CGGAGCACCC AGAGATCAAG ACGGTCTATA TGTCCGGCTA CACAGATAAT
GTCATTGTCA AACAGGGCAT GGTCGAGCCT GGGCTCGCCT TTATCCAGAA ACCGTTTTCC
ATGGAAGGAC TCGCCCGCAA GGTGCGCCGG GTACTCGACG CTGACGAATA A
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| Protein sequence | MARESFLPNT PEKPVRLYAV LGLCVLGICI AIIVTWSTGR RMTVHHARLV HTATEIKFQV
SQAHIWLEEG LLGDPTVERD TFMTHLDQAE ALAVAMLEGG MGAGEPLRPV QTAGLRREIR
SLRGSLAQYR SQSLERWALR EQGTAQVGSP RDQRLDSVYQ EVVESNQAMI EALHSKIRFD
LAQFYWTLFG ILVFVTVLAV LSWYSLRRYI GQRNRAIASL SRSEEDLRTT LMSIGDGVIS
TDTQGRVTRM NEVAQHLTAW DEKEALGRPL EEVFAIANAL TGKEVEAPIH RVLREGMVVG
LANHTVLTAR DGTRRQIADS AAPIRVCDGE ITGVVLVFRD VTEQYEQERR VQESETRFRA
LFELMGQGVV FHAPDGRIVD ANPAAQRILG LTLDQLQARR PFDPSWKCVD SDGQDFPMSE
HPAMEVLRTG EAVAGVVIGV FHPGRQKFVW IRVSAVPLFS RDSGKPLEVF ASFEDITELK
EAEEALRSSE AELRYLFDTA PVGIFRTTST GRVLKVNPKM AEIVGCDSPE QALERYQDLF
VDLYADSERR SVFLDRLQRE GEILQFEYEG FRRNGARRWF MMNARLSGYL EDGSFLIDGF
TSDITERREA QERIQHLNLV LRAIREVNQL ITREKDAEQL LRKANQLMVA HRGYSSALVI
RTDANGRPQT YYHAGEDNSP IFQPLAEHIE AGMLPPCCRL LDSKTEVLFV PKAEGACAGC
PQENTCQTFD TLCVALRYAD RFFGYIAVAL PQGRGYDPEE QNLFQEAAND VAFALYTIEQ
EAQVKQATAE RERMEDQLQQ AQKMEAVGRL AGGVAHDFNN MLNVILGYTD TSLLQMDRGH
PLYEAMTQIH LAAERSADLT RQLLAFSRKQ ITQPQVLNLN TLLENQSKML DRLIGEDVEL
QFVPATSLWN VRLDPSQLDQ ILANLVVNAR DAMPEGGTIT IETGNVVLDE AYSSRLLSVE
AGEYVLLAVS DSGKGLPPEM QEQIFEPFFT TKSKGEGTGL GLSTVYGIVQ QNQGFIHLYS
EMESGTTFKI YLPRVIEEAV QPTQEEDHGP LTGRETLLVV EDEEQLLELI GSVLEEYGYT
VLAAGSPQQA MDLAAKTKTP IELMLTDVVM PGMNGKMLRA RIQAEHPEIK TVYMSGYTDN
VIVKQGMVEP GLAFIQKPFS MEGLARKVRR VLDADE
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