| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1642 |
|---|
| Symbol | |
|---|
| ID | 8419473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1891944 |
|---|
| End bp | 1893422 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645038216 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003198504 |
|---|
| Protein GI | 258405762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02231] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.44937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTTT GTCTGTTTGC GTGGATAGTT GTGGGGGCGT TATTGCTGCC CCACGGCGTG
TTGGCTGCCC CGGAGACTAT CGTCCTGTTC CCTGAAGGGG GACAGGTGAC GGATGTCCGC
GAGATCGCCG GCGAGTCTCA GGAGATTGTC TGGGAACTTC GAGGGCAGGT CGCACCGGAT
TCGGTGCGGG TCCGCCTCCC CGACGGCGGG ACCATTGAAG GGCTCCAGAC GTCGCGGGTC
GAACTTGAGG CCGAGGAGGT GGCCCCGGAG TTGGTGAGCA AGGTGGAGAC CGCCAAGCGC
CAGTTGGAGA AGCTTCGGGT CCGTCAACAG GCGGCCGAGT CCGAGGTCGC CTTGATTCAG
GGGCTCGCTG ATGCCGGTGA GGTCGACTGG GAACAGAGCA CGTCCTGGCG GGAGCAGCTG
GAGGCGGCCT TGCACCGTTC TTCGGCGCTC GGAGAGGATA TCGCCTCTAT CAATGCGACC
CTGACCGCGG CCCAGGACGA AATCGATCGA CTGCTGCAGC AGCCGCGGTG GCGGGTGCAG
GTACGCATCA GCGAGCTTCC CGCCGGTGGG GCAGAGGCTG AGCTGCATTA CCGACTGAAC
GACTGCGGCT GGGATCCGTT GTATCGTGTT GAAGGCCTCT CCGAGCAGGG AGAGGTCCGT
TTTACCTGGC GGGCTCGAAT CCATCAGCAA TCCGGCCTCA AATGGAGCGG CGTGGATATG
ACTGTGGCCA CGGTACCGCC GCGGACCCGT TTACGGCCGC CCGAGGTGCC GGACTGGATC
ATGCGCCCCC AGCCAGAGGT GCGCCCCATG GCCAAACAGG CCGGGGAGAC CGCGATGCTG
GCCGCTGAAG ACTCCCGCAG TGCCCGCGCT CCACACCACA CGGCTGCGAC GGGATTTTCG
CTGTGGCACG TCGGCCGGAT GGATCTCGCG GACGGTGAAC AGCAGGTGGT CACCCTTGAA
GACCGGACCC TGGCGGCCGA GTTCACGCGT CTGGCCCGCC CGGAGCGCAG CAACCAGGTC
TTTGTCCGCG CCGCCTTGGC TTCCCCGCTC GAGCGCGATC TGCTCCAGGG ACCAGGACAG
TTCTTTCTCG ACGGGGTTTT TCTGCGCCAG CAGCGCCTGG ACGCGGTGGG GCAGGAGCTC
TTTTTTGGCA CTGATCCCTT TGTGCAGGCC AAAATGCGGT CGCGAACCAT TCAGTCCGGC
GACGAAGGGG TTCTGGCCCG ACGGCAGACC CGGCGTTGGG AATGGGATAT CGCCCTGACC
AACAAACGGC AGCGGCCCGT GGATGTCCGG GTGGAACTCG CCGCGGCCCA AAGCCGTCAC
GAGGATATCC GGGTGGAACA GGAGTTTTCC ACACCAGCCA AGCGCCAGGA AAATCGGTAC
TTCCTGGATT TGACCGTGCC GGCGCAAGGC GAGCGTGAGG CGCGAATGAC CGTGCGGGCC
GAGGCGCCGA AAGACATGCC GGTCTGGTGG GGCCGATAA
|
|---|
| Protein sequence | MRFCLFAWIV VGALLLPHGV LAAPETIVLF PEGGQVTDVR EIAGESQEIV WELRGQVAPD
SVRVRLPDGG TIEGLQTSRV ELEAEEVAPE LVSKVETAKR QLEKLRVRQQ AAESEVALIQ
GLADAGEVDW EQSTSWREQL EAALHRSSAL GEDIASINAT LTAAQDEIDR LLQQPRWRVQ
VRISELPAGG AEAELHYRLN DCGWDPLYRV EGLSEQGEVR FTWRARIHQQ SGLKWSGVDM
TVATVPPRTR LRPPEVPDWI MRPQPEVRPM AKQAGETAML AAEDSRSARA PHHTAATGFS
LWHVGRMDLA DGEQQVVTLE DRTLAAEFTR LARPERSNQV FVRAALASPL ERDLLQGPGQ
FFLDGVFLRQ QRLDAVGQEL FFGTDPFVQA KMRSRTIQSG DEGVLARRQT RRWEWDIALT
NKRQRPVDVR VELAAAQSRH EDIRVEQEFS TPAKRQENRY FLDLTVPAQG EREARMTVRA
EAPKDMPVWW GR
|
|---|
| |