Gene Dret_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1641 
Symbol 
ID8419472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1890907 
End bp1891827 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content64% 
IMG OID645038215 
Productprotein of unknown function DUF362 
Protein accessionYP_003198503 
Protein GI258405761 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGG ATCGTCGTAC CTTTTTGAAA TGGCAGGCCG CCACGGCCTT GTCGCTTGCC 
GGTTCCTGTG CGGCGGGCCC CCTGTCGGTC TGGGCCCAAA AGCCCCCGGA CCTGGCCGTG
ATTCAGGGCG GCCCGGAAGC GGCAACCCGT GCGGCTGTCG AGGCCTTGGG CGGCATGGGC
CGTTTTGTCC GTCCCGGACA GCGGGTGGTG ATCAAACCGA ATATGAGCTT TGACAATCCC
CCGGAAATGG CGACCACGAC CCATCCCGCC GTGGTCAGCA CCCTGGTGGC CCTCTGCCAG
GAGGCCGGAG CCGATACGGT CATGGTCCGC GACCACACCT TGCGCGGGGT CGAGCAATGC
CTGGAGCACA CCGGCATCCG AGAGGCCTGC CAACCTTTGT CCGGGAGCGA CGTGCGCGGT
GTCAATGTCC CGGACGGGTT CGCGCCGACT TCGATTCCAG GGGCGACTCA CTATACTGAA
ACCGCTGTCA TGGGGGAGGT TCTGGAGGCG GACGTGCTCA TTGCCGCGCC GGTGGCCAAA
CACCACGGCA GCACCGGGGT CAGCTTGTCC ATGAAAGGCA TGATGGGACT TATCTACAAC
CGGGGTGAGC TGCATTGGCG GTACAATCTG CACACGGCTA TTGCGGATCT CATGCGGCTT
TTGCGGGCGG ATCTGACGGT GATCGACGTG ACCCGGGCCT TGACCACCAA TGGTCCCAGT
GGGCCGGGCG AGGTCAAGCA GATGGATACT GTGGTGGCCT CCACGGACAT GGTCGCCGCC
GATGCCCAGG TCGTATCCAT GGTCCCCTGG TACGGCCGCA ACATCACTCC GGACAAGGTC
GAGCATATTC GGGTGGCCCA TGAGTGGGGC CTGGGCCGTC TCGATATCGA TAATCTGCAT
CTGCACCGGG CGGCGGTGTG A
 
Protein sequence
MSLDRRTFLK WQAATALSLA GSCAAGPLSV WAQKPPDLAV IQGGPEAATR AAVEALGGMG 
RFVRPGQRVV IKPNMSFDNP PEMATTTHPA VVSTLVALCQ EAGADTVMVR DHTLRGVEQC
LEHTGIREAC QPLSGSDVRG VNVPDGFAPT SIPGATHYTE TAVMGEVLEA DVLIAAPVAK
HHGSTGVSLS MKGMMGLIYN RGELHWRYNL HTAIADLMRL LRADLTVIDV TRALTTNGPS
GPGEVKQMDT VVASTDMVAA DAQVVSMVPW YGRNITPDKV EHIRVAHEWG LGRLDIDNLH
LHRAAV