Gene Dret_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1631 
Symbol 
ID8419462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1879606 
End bp1880397 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content62% 
IMG OID645038205 
Productnitroreductase 
Protein accessionYP_003198493 
Protein GI258405751 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAAA TCCAAATCAC CCCTGAAAAA TGCCTGCAAG ACGGGATTTG TGTCCAAACC 
TGCCCCTTTG GGCTCTTCCG GGACCACCCC GACGGGATCC CCGAAATAGT GGATGGCGCC
GGTGAATTGT GTATCGGTTG CGGCCATTGC GTGGCCATCT GTCCTGGCGA GGCCATCAGC
CTCGACGGCC AAGGCCCTGA ATGGTGCGAC CCGGTGGACA GAACATGGGC TCCTTCCAAA
GAGCAGATCC TCTACCATTT TCGCAGCCGC CGCTCCATTC GGGTCTACAA AGAGGAGGCG
GTGGACCGGC CGACATTGGA ATCGCTGCTG GATCTTGCCC GCTGGGCGCC GTCAGCCCGC
AACGGCCAGC CGGTGCACTG GATCGTCTTC CAGGACCACG AGGCCATCCA CAATCTGGCG
CGCCTGGTCG TGGACTGGAT GCGGCACAAG AACCTCCTCC CGGAAATCGT GCACGCCTTT
GACAACGGCA AAGACATGAT CAACCGCCAC GCCCCTTGCC TGGTAGTCGC CCATGCTTCG
GAGCAGGCTC TCAAACCGGT TGAGGACTGC TCGATTGCCC TGGCGCATAT CGAGGCCGCC
GCCCCGGCAT TCGGTCTGGG CGGCTGCTGG GCCGGCTTCT TCATGACCGC TGCCCAGCAG
TATCAGCCTC TCGTGGATGT CCTGGACCTT CCCCAAGGGC ATCGTGTCTA CGGCGCTCTC
ATGCTCGGCG TCCCCCGCTT CTCCTACCGC CGGATTCCCC CCAGGCAGGA ATTGCAGGTA
CAGTGGCGCT GA
 
Protein sequence
MHQIQITPEK CLQDGICVQT CPFGLFRDHP DGIPEIVDGA GELCIGCGHC VAICPGEAIS 
LDGQGPEWCD PVDRTWAPSK EQILYHFRSR RSIRVYKEEA VDRPTLESLL DLARWAPSAR
NGQPVHWIVF QDHEAIHNLA RLVVDWMRHK NLLPEIVHAF DNGKDMINRH APCLVVAHAS
EQALKPVEDC SIALAHIEAA APAFGLGGCW AGFFMTAAQQ YQPLVDVLDL PQGHRVYGAL
MLGVPRFSYR RIPPRQELQV QWR