Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1631 |
Symbol | |
ID | 8419462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1879606 |
End bp | 1880397 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645038205 |
Product | nitroreductase |
Protein accession | YP_003198493 |
Protein GI | 258405751 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAAA TCCAAATCAC CCCTGAAAAA TGCCTGCAAG ACGGGATTTG TGTCCAAACC TGCCCCTTTG GGCTCTTCCG GGACCACCCC GACGGGATCC CCGAAATAGT GGATGGCGCC GGTGAATTGT GTATCGGTTG CGGCCATTGC GTGGCCATCT GTCCTGGCGA GGCCATCAGC CTCGACGGCC AAGGCCCTGA ATGGTGCGAC CCGGTGGACA GAACATGGGC TCCTTCCAAA GAGCAGATCC TCTACCATTT TCGCAGCCGC CGCTCCATTC GGGTCTACAA AGAGGAGGCG GTGGACCGGC CGACATTGGA ATCGCTGCTG GATCTTGCCC GCTGGGCGCC GTCAGCCCGC AACGGCCAGC CGGTGCACTG GATCGTCTTC CAGGACCACG AGGCCATCCA CAATCTGGCG CGCCTGGTCG TGGACTGGAT GCGGCACAAG AACCTCCTCC CGGAAATCGT GCACGCCTTT GACAACGGCA AAGACATGAT CAACCGCCAC GCCCCTTGCC TGGTAGTCGC CCATGCTTCG GAGCAGGCTC TCAAACCGGT TGAGGACTGC TCGATTGCCC TGGCGCATAT CGAGGCCGCC GCCCCGGCAT TCGGTCTGGG CGGCTGCTGG GCCGGCTTCT TCATGACCGC TGCCCAGCAG TATCAGCCTC TCGTGGATGT CCTGGACCTT CCCCAAGGGC ATCGTGTCTA CGGCGCTCTC ATGCTCGGCG TCCCCCGCTT CTCCTACCGC CGGATTCCCC CCAGGCAGGA ATTGCAGGTA CAGTGGCGCT GA
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Protein sequence | MHQIQITPEK CLQDGICVQT CPFGLFRDHP DGIPEIVDGA GELCIGCGHC VAICPGEAIS LDGQGPEWCD PVDRTWAPSK EQILYHFRSR RSIRVYKEEA VDRPTLESLL DLARWAPSAR NGQPVHWIVF QDHEAIHNLA RLVVDWMRHK NLLPEIVHAF DNGKDMINRH APCLVVAHAS EQALKPVEDC SIALAHIEAA APAFGLGGCW AGFFMTAAQQ YQPLVDVLDL PQGHRVYGAL MLGVPRFSYR RIPPRQELQV QWR
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