| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1627 |
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| Symbol | |
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| ID | 8419458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1877730 |
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| End bp | 1878395 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645038201 |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_003198489 |
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| Protein GI | 258405747 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.839518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGCT TTATGGCTAA TCCCCTGATT GCCTTGGGAA GATTTGTCCT TGTCTGGTTT
ATCATCCTTC TCTCCCCGGG CCTGGTTTTT TCCTGGACAG GTAAGGCGGT CCATATCAAA
GACGGCGATA CGATCGTGGT CTTACGAGAC CATACTGAGG TCGACGTGCG CCTGTATGGT
ATCGACTGTC CGGAAAAACG CCAGCATTTT GGGACCAGAG CCAAGCGGTT TACTGCTAAG
ATGGTCGGTA TGCAGCGCGT GGAAGTCCAA GAAATGGATG TTGACCGCTA CGGTCGCGTG
GTCGGCCTTG TCGCCTTGGC CGGTTCAGGG GAAAGTCTTA ATGCGGCATT GCTCTATAAT
GGCCTAGCCT GGGTTTATCA TAAGTATTGC GGACAAGATT TTTGTGGCCG CTGGATCACC
TTGGAACGAA AGGCGAAGCT CGCCAAGCGG GGGCTGTGGG GGCAACCAAA TCCGATCCCC
CCTTGGGAGT GGCGGCATGG TGGCCGTTCT GGTAGCCAGA GTAGAAGCGG GGCTGGTGGC
GACAAGGATT GTAGCGATTT TTCGACCCAG GCCCAGGCGC AGCGGTTCTT TGAGGCCCAT
CAACCCGGCG ACCCCCACCA GTTGGACGGA GATGGGGACG GGCAGGTGTG TGAGGGGTTG
CCGTGA
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| Protein sequence | MRRFMANPLI ALGRFVLVWF IILLSPGLVF SWTGKAVHIK DGDTIVVLRD HTEVDVRLYG
IDCPEKRQHF GTRAKRFTAK MVGMQRVEVQ EMDVDRYGRV VGLVALAGSG ESLNAALLYN
GLAWVYHKYC GQDFCGRWIT LERKAKLAKR GLWGQPNPIP PWEWRHGGRS GSQSRSGAGG
DKDCSDFSTQ AQAQRFFEAH QPGDPHQLDG DGDGQVCEGL P
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