| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1625 |
|---|
| Symbol | |
|---|
| ID | 8419456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1875386 |
|---|
| End bp | 1876822 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 645038199 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003198487 |
|---|
| Protein GI | 258405745 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCTC TTGAATTCTC TTTTCCAGCA GGACGATATC ACGCCAATCC ATGGGGACGC
AATGTCAACG AAGGTGAGGC GGAATGGCCT CCTTCGCCGT ACAGGCTCGC CAGGACGCTT
ATCGACATCC AAAAACGCCG CTTCCCTGAC TGGTCCCAAT CAAGGATTGA AGCCGTCCTA
GTGGCAATCA GCGGTAAGCC ATTCTATACA TTGCCACCAG CTACAACAGC TCATATCCGT
TCCTTTATGA GCAGCAACCA AAAGGATGCT TCCAAAAAAC AAAAAATTTT CGACTCGTTT
GTGGCTTTAG GACGGGAAGA AATACTTTAC ATAGCCTTTG ACCATAAGTT GGACGCACAG
ACGCGATCTG ACTTGACAGC ACTCGTGGCT GAAATCAATT ATCTAGGTAG GTCTGAATCT
TGGGTATCAG TAGGATTGAA GGACCTCCCC GAAGTCGCAG AATGGGATTG CCTGCCGAGT
GATGTGGCCC CTGAGGACCC CCAGTATGAA ATCGAAAAAC TCGCTTGCGT ACTACCCAAA
GGGGATTACC AAGCCCTACC TGTGAGTGAA CGGGTGTCTT GGTTTGACGC CCTGTGCCTT
TCGACGCAGG ATCTGTTGAA GCAGGGCTGG AGTACTCCCC CTGCCCTAGC CTGGGTTGAC
TATGCCCGGA AACGCTCCAA GCTTAACCAG TCCTCCCTTG AGGAAACCAG AGCGAGAACA
CAACGCGACT ACCGGCATAT AAAATACGCT GTGCATTCAA AGGTCCGTCC TCATGTCCGG
GAAACGATCT TGTTTGCTGA ACGGGTCAGG GCCAAATTGA TGGGGATACA CCGAAAGACC
CAGGGTGATG ATCCAGAAAA GGTCTCAGCC AAGTTTAGTG GAAAAAATCT TGATGGGCTA
CCGCTTGAAA ACCATAAACA CGCCTTTTTT CTCCCCCTTG ACGAAGACAA CGACGGACGA
ATTGACCATC TACTCATTAC GGCCGATGAG CCGTTTGATT CCACAGAATT GATGGCTCTG
GATCGACTGC GCTCCATCTG GCAGCCCCAT GGCAAACCAG ATGCAAGCCT AATCCTGACA
TCTGTCCAGA AAAACGCACG CCCCAAACAT GCAAAAACCT GGATTAGTGT TACCCCTTTT
GTCACAGCTC GGCATTTTCG CAAAGGCAGA GGGACATATT GGGGGTGGCT TACCGGGGAG
ATAAAGCGTG AATGCCGTTT CCATTTTCTT CCACAGCCAC AAGAGGTCAA CTGGATTCAG
TGGACCATGA ACGGCCCCCA GCCGATCAGG TGGATGGAAT TTACCCGAGG CAAAAGAGAG
GAACGCCCCT TCCGCGGGCA TGGGTGCATC CTGCGATTCG ACTCACCGGT ACCTGGCCCT
TTTGCGCTTG GCGCACGGGG CCATTTTGGC TTGGGACTAT TCCAGCCGCT GGAATAA
|
|---|
| Protein sequence | MLALEFSFPA GRYHANPWGR NVNEGEAEWP PSPYRLARTL IDIQKRRFPD WSQSRIEAVL
VAISGKPFYT LPPATTAHIR SFMSSNQKDA SKKQKIFDSF VALGREEILY IAFDHKLDAQ
TRSDLTALVA EINYLGRSES WVSVGLKDLP EVAEWDCLPS DVAPEDPQYE IEKLACVLPK
GDYQALPVSE RVSWFDALCL STQDLLKQGW STPPALAWVD YARKRSKLNQ SSLEETRART
QRDYRHIKYA VHSKVRPHVR ETILFAERVR AKLMGIHRKT QGDDPEKVSA KFSGKNLDGL
PLENHKHAFF LPLDEDNDGR IDHLLITADE PFDSTELMAL DRLRSIWQPH GKPDASLILT
SVQKNARPKH AKTWISVTPF VTARHFRKGR GTYWGWLTGE IKRECRFHFL PQPQEVNWIQ
WTMNGPQPIR WMEFTRGKRE ERPFRGHGCI LRFDSPVPGP FALGARGHFG LGLFQPLE
|
|---|
| |