Gene Dret_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1612 
Symbol 
ID8419443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1859647 
End bp1862247 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content45% 
IMG OID645038186 
Producthypothetical protein 
Protein accessionYP_003198474 
Protein GI258405732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.15742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.514221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTC AAAAAACAAC AAACCCTAAT CACCTTAACG CCTATTTAGA GGCATTGATC 
CCAGACTCTG ATATTGAATT GCCTGATGGC TCCATTCCTG AAACCCATGC TTTTATATTT
AACGCCAAAA CCAAAAAAAT AAATATTAAA AGGTTTCAAG TAGATAAATT GGAAGATCTT
AAGCAAAAAA TTAAGGACAA TATCCAGGGC AACCATATAT ATATGCCAAT TGGTTTTCAG
AAACCTGGAC TGCCAAGGCA AGCAAAAGGA GCACAAGAAG ATGTAGTCGG ACTGTTTGGA
TTTGCTCTAG ATATTGACAT AAAAGGAGAT GGACACGCTC AAAAAAAATT ACCGGAAACG
ACTAGCGAAG CATTTCAGTT GGCATACTCC ATTCCTGACT TCTCACCTTC CATGATCGTC
CATTCAGGAG GGGGAATACA CGCCTACTGG TTTTTTAAAG AGCCATGGAT TTTTGATAGT
GAGAAGGAGA AAGATAGTGC AAAAAATATG TGGAAGAGTT TCGAAAAAAC ATTTCATAGG
TATGCAAGTG AAAAAGAATG GGAAATTGAC ACAATCAGCA ACATAGATCG TGTCTTGCGA
GTTCCAGGAA CTTACAACCA AAAGAATGAA CCAGCTGTGC AAGCTTGCAT CCTTGAGGAT
AAATCTCAAG AGCTACGATA TAACCCTAAT GATTTTGAAG AATTCCTAAC ATTCGCTGAT
GAATTTCAAA AATCTCCATC TCAAGCAACT AAAGCGAATG AGGAAGATTT TTCACCGGCT
GAATTCGAAA AGATCTTCGA TCAATGCTCT TTTGTTCAGC ACGGATGTAC CGAGGCAGAA
ACCCTGCCGG AACCGGCCTG GTATCCCTTG ATTGGCATCC TTGCTCGCTG CGAAGACGGC
GAAACTTTGT GTCACGAGCA CAGCAGACCG TATCCCCAAT ACACTTACGA GGAGACACAG
CGAAAAATTG AACATGCGCT GAGGGACGCC GGCCCCCCGA CATGCTCTCG GCTTCGAGAG
GAATTTCCTG AAATATGCGA GGATTGTCCA AACAGTGTAT CAACTCCTCT CCAACTCGGG
CGAGCAGCCA ACGAAAATCG ATCACGCTCT TCGAACCAAC GCCAGGGGCG GGGAAATCGG
CGGACTTCAG ATCAAGACCT GCTTGTCAGT CTCGCCCCGC CAAGCGATCA GATGTTCTAT
GAGGAAGGCT CTAAGGTGAC CACATACATC AGAGTGGAGA GAAAAAACCA TTTTGAGATA
CTACCGGTTA ATAGCATGGC TTTCAAACTC CACCTCGCGT ACAAATTCAG AGACCAGTAT
GGCCGCACCC CTGGCGAAAC AGCTCTCAAC GCAGCGATCC GACAAATCAC CGCAATAGCC
TTTGCAGAAG GGGCGGCTCG AAAAACCTTT GTCAGGTCTG GCCACCATGA GGAAAAACTT
TATCTAGATC TTTGCGACGA CCAAGGCCAA GTCATTGAAA TTGACTCCAC GGGCTGGCGA
ATGACGAAAT CAGCCCCTGT CTTGTTTCGG AAATTAGACC ACTTGAAACC ACTCCCTGTA
CCAACTTCAG GAAGCAATAT CAATGAACTG ATGAACATAC TCGATATTGG TCATGAAGAA
CGAATACTGG TTGTATCTTG GCTATTATCG AGTATAAACC CAAAAGTGAA CACCCCACTT
CTTTATATTC AGGGCGACCC TGGATCTGGA AAATCAACCA TTGCAAAAAC AATTCAATCC
TTAATTGACC CATCTTCATC CTATGGGATG CATTTACCAA AAGACCCTAC AGAACTTTTA
AGAGCCTCTT ATAACTTTCG GATACTGAAT TTTGACAATG TTTCGCGCGT ATCTATAGAT
CAATCTAATG CTCTTTGCCA AGCAGTGACC GGCGGCAGCA TGTTTAGCCG TAAACTGTAT
ACTGACACAG AGCTAGTTAC GTGTTCAGTG AAAAGCCCAA TCATTTTGAA CGGTATAGAA
AATAGTTTAC TTCGGCAAGA TGCTATCGAC AGATCGATCA GGATACATCT GAAACGTATT
CCTAGATATC AACGCAAAAC AGAAGCGGAT CTTTTCGAGA ACATCTCTAA GTTGCAGCCA
CTTATTCTGG GAGCACTGTG TGACGCTGCC TCGACCGCTA TCGACAAATT GCCTGCCATC
CAACTGGACG AGCTTCCGCG CATGGCGGAT TTTGCTCGCT GGGTTTATGC CGCATGCCTA
AGTGAGGCTA TTCCCTTCAC GGCTGAGGAA TTCCGCACTA CCTACTTAAA TCACGTAAAT
GACATGGCTA ATATAGCGCT GGACCAAGAC CCGGTCGCAT ACCACCTAAA AGATATCGCT
TATGAGGATG GTGTGTGGGA AGGAACAGCG ACCGAGTTGC TGGAAAGGCT CAATGACCAT
GCCAGTGACT CGAGTAAGTC ACATCCTCGC TGGCCCAAGA ACCCAGCACA GCTTAGCCAA
CACATAAACC TCATTCGAGC TCTACTTGAA GAAGCTGGGG TTAAAATCGA CAAAGGGCAA
AGGAAAAAAG GACAACGGAT AATTCGCATC GAAACTCTCC ACCGAGTGAG AGAAACTATC
GAAATCCAAA AGAGTCTCTA A
 
Protein sequence
MDIQKTTNPN HLNAYLEALI PDSDIELPDG SIPETHAFIF NAKTKKINIK RFQVDKLEDL 
KQKIKDNIQG NHIYMPIGFQ KPGLPRQAKG AQEDVVGLFG FALDIDIKGD GHAQKKLPET
TSEAFQLAYS IPDFSPSMIV HSGGGIHAYW FFKEPWIFDS EKEKDSAKNM WKSFEKTFHR
YASEKEWEID TISNIDRVLR VPGTYNQKNE PAVQACILED KSQELRYNPN DFEEFLTFAD
EFQKSPSQAT KANEEDFSPA EFEKIFDQCS FVQHGCTEAE TLPEPAWYPL IGILARCEDG
ETLCHEHSRP YPQYTYEETQ RKIEHALRDA GPPTCSRLRE EFPEICEDCP NSVSTPLQLG
RAANENRSRS SNQRQGRGNR RTSDQDLLVS LAPPSDQMFY EEGSKVTTYI RVERKNHFEI
LPVNSMAFKL HLAYKFRDQY GRTPGETALN AAIRQITAIA FAEGAARKTF VRSGHHEEKL
YLDLCDDQGQ VIEIDSTGWR MTKSAPVLFR KLDHLKPLPV PTSGSNINEL MNILDIGHEE
RILVVSWLLS SINPKVNTPL LYIQGDPGSG KSTIAKTIQS LIDPSSSYGM HLPKDPTELL
RASYNFRILN FDNVSRVSID QSNALCQAVT GGSMFSRKLY TDTELVTCSV KSPIILNGIE
NSLLRQDAID RSIRIHLKRI PRYQRKTEAD LFENISKLQP LILGALCDAA STAIDKLPAI
QLDELPRMAD FARWVYAACL SEAIPFTAEE FRTTYLNHVN DMANIALDQD PVAYHLKDIA
YEDGVWEGTA TELLERLNDH ASDSSKSHPR WPKNPAQLSQ HINLIRALLE EAGVKIDKGQ
RKKGQRIIRI ETLHRVRETI EIQKSL