Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1612 |
Symbol | |
ID | 8419443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1859647 |
End bp | 1862247 |
Gene Length | 2601 bp |
Protein Length | 866 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645038186 |
Product | hypothetical protein |
Protein accession | YP_003198474 |
Protein GI | 258405732 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.15742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.514221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC AAAAAACAAC AAACCCTAAT CACCTTAACG CCTATTTAGA GGCATTGATC CCAGACTCTG ATATTGAATT GCCTGATGGC TCCATTCCTG AAACCCATGC TTTTATATTT AACGCCAAAA CCAAAAAAAT AAATATTAAA AGGTTTCAAG TAGATAAATT GGAAGATCTT AAGCAAAAAA TTAAGGACAA TATCCAGGGC AACCATATAT ATATGCCAAT TGGTTTTCAG AAACCTGGAC TGCCAAGGCA AGCAAAAGGA GCACAAGAAG ATGTAGTCGG ACTGTTTGGA TTTGCTCTAG ATATTGACAT AAAAGGAGAT GGACACGCTC AAAAAAAATT ACCGGAAACG ACTAGCGAAG CATTTCAGTT GGCATACTCC ATTCCTGACT TCTCACCTTC CATGATCGTC CATTCAGGAG GGGGAATACA CGCCTACTGG TTTTTTAAAG AGCCATGGAT TTTTGATAGT GAGAAGGAGA AAGATAGTGC AAAAAATATG TGGAAGAGTT TCGAAAAAAC ATTTCATAGG TATGCAAGTG AAAAAGAATG GGAAATTGAC ACAATCAGCA ACATAGATCG TGTCTTGCGA GTTCCAGGAA CTTACAACCA AAAGAATGAA CCAGCTGTGC AAGCTTGCAT CCTTGAGGAT AAATCTCAAG AGCTACGATA TAACCCTAAT GATTTTGAAG AATTCCTAAC ATTCGCTGAT GAATTTCAAA AATCTCCATC TCAAGCAACT AAAGCGAATG AGGAAGATTT TTCACCGGCT GAATTCGAAA AGATCTTCGA TCAATGCTCT TTTGTTCAGC ACGGATGTAC CGAGGCAGAA ACCCTGCCGG AACCGGCCTG GTATCCCTTG ATTGGCATCC TTGCTCGCTG CGAAGACGGC GAAACTTTGT GTCACGAGCA CAGCAGACCG TATCCCCAAT ACACTTACGA GGAGACACAG CGAAAAATTG AACATGCGCT GAGGGACGCC GGCCCCCCGA CATGCTCTCG GCTTCGAGAG GAATTTCCTG AAATATGCGA GGATTGTCCA AACAGTGTAT CAACTCCTCT CCAACTCGGG CGAGCAGCCA ACGAAAATCG ATCACGCTCT TCGAACCAAC GCCAGGGGCG GGGAAATCGG CGGACTTCAG ATCAAGACCT GCTTGTCAGT CTCGCCCCGC CAAGCGATCA GATGTTCTAT GAGGAAGGCT CTAAGGTGAC CACATACATC AGAGTGGAGA GAAAAAACCA TTTTGAGATA CTACCGGTTA ATAGCATGGC TTTCAAACTC CACCTCGCGT ACAAATTCAG AGACCAGTAT GGCCGCACCC CTGGCGAAAC AGCTCTCAAC GCAGCGATCC GACAAATCAC CGCAATAGCC TTTGCAGAAG GGGCGGCTCG AAAAACCTTT GTCAGGTCTG GCCACCATGA GGAAAAACTT TATCTAGATC TTTGCGACGA CCAAGGCCAA GTCATTGAAA TTGACTCCAC GGGCTGGCGA ATGACGAAAT CAGCCCCTGT CTTGTTTCGG AAATTAGACC ACTTGAAACC ACTCCCTGTA CCAACTTCAG GAAGCAATAT CAATGAACTG ATGAACATAC TCGATATTGG TCATGAAGAA CGAATACTGG TTGTATCTTG GCTATTATCG AGTATAAACC CAAAAGTGAA CACCCCACTT CTTTATATTC AGGGCGACCC TGGATCTGGA AAATCAACCA TTGCAAAAAC AATTCAATCC TTAATTGACC CATCTTCATC CTATGGGATG CATTTACCAA AAGACCCTAC AGAACTTTTA AGAGCCTCTT ATAACTTTCG GATACTGAAT TTTGACAATG TTTCGCGCGT ATCTATAGAT CAATCTAATG CTCTTTGCCA AGCAGTGACC GGCGGCAGCA TGTTTAGCCG TAAACTGTAT ACTGACACAG AGCTAGTTAC GTGTTCAGTG AAAAGCCCAA TCATTTTGAA CGGTATAGAA AATAGTTTAC TTCGGCAAGA TGCTATCGAC AGATCGATCA GGATACATCT GAAACGTATT CCTAGATATC AACGCAAAAC AGAAGCGGAT CTTTTCGAGA ACATCTCTAA GTTGCAGCCA CTTATTCTGG GAGCACTGTG TGACGCTGCC TCGACCGCTA TCGACAAATT GCCTGCCATC CAACTGGACG AGCTTCCGCG CATGGCGGAT TTTGCTCGCT GGGTTTATGC CGCATGCCTA AGTGAGGCTA TTCCCTTCAC GGCTGAGGAA TTCCGCACTA CCTACTTAAA TCACGTAAAT GACATGGCTA ATATAGCGCT GGACCAAGAC CCGGTCGCAT ACCACCTAAA AGATATCGCT TATGAGGATG GTGTGTGGGA AGGAACAGCG ACCGAGTTGC TGGAAAGGCT CAATGACCAT GCCAGTGACT CGAGTAAGTC ACATCCTCGC TGGCCCAAGA ACCCAGCACA GCTTAGCCAA CACATAAACC TCATTCGAGC TCTACTTGAA GAAGCTGGGG TTAAAATCGA CAAAGGGCAA AGGAAAAAAG GACAACGGAT AATTCGCATC GAAACTCTCC ACCGAGTGAG AGAAACTATC GAAATCCAAA AGAGTCTCTA A
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Protein sequence | MDIQKTTNPN HLNAYLEALI PDSDIELPDG SIPETHAFIF NAKTKKINIK RFQVDKLEDL KQKIKDNIQG NHIYMPIGFQ KPGLPRQAKG AQEDVVGLFG FALDIDIKGD GHAQKKLPET TSEAFQLAYS IPDFSPSMIV HSGGGIHAYW FFKEPWIFDS EKEKDSAKNM WKSFEKTFHR YASEKEWEID TISNIDRVLR VPGTYNQKNE PAVQACILED KSQELRYNPN DFEEFLTFAD EFQKSPSQAT KANEEDFSPA EFEKIFDQCS FVQHGCTEAE TLPEPAWYPL IGILARCEDG ETLCHEHSRP YPQYTYEETQ RKIEHALRDA GPPTCSRLRE EFPEICEDCP NSVSTPLQLG RAANENRSRS SNQRQGRGNR RTSDQDLLVS LAPPSDQMFY EEGSKVTTYI RVERKNHFEI LPVNSMAFKL HLAYKFRDQY GRTPGETALN AAIRQITAIA FAEGAARKTF VRSGHHEEKL YLDLCDDQGQ VIEIDSTGWR MTKSAPVLFR KLDHLKPLPV PTSGSNINEL MNILDIGHEE RILVVSWLLS SINPKVNTPL LYIQGDPGSG KSTIAKTIQS LIDPSSSYGM HLPKDPTELL RASYNFRILN FDNVSRVSID QSNALCQAVT GGSMFSRKLY TDTELVTCSV KSPIILNGIE NSLLRQDAID RSIRIHLKRI PRYQRKTEAD LFENISKLQP LILGALCDAA STAIDKLPAI QLDELPRMAD FARWVYAACL SEAIPFTAEE FRTTYLNHVN DMANIALDQD PVAYHLKDIA YEDGVWEGTA TELLERLNDH ASDSSKSHPR WPKNPAQLSQ HINLIRALLE EAGVKIDKGQ RKKGQRIIRI ETLHRVRETI EIQKSL
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