Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1606 |
Symbol | |
ID | 8419436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1852812 |
End bp | 1853627 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645038179 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_003198468 |
Protein GI | 258405726 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.800186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGGAG CAAGCGATCT TTTCTCTTTG TCCCGGCGCT CTTTGTTTGC CATTGTCGGG CCATGTGCTC TGGAAGAGCT GGAACTCGGC CTGCGGGTAG CCGAACGGCT GGCCGCCATT CAGGACGAGT TGGGCATCCC TCTGGTATTC AAGAGCTCGT TCGACAAGGC CAACCGGAGT TCCGTGGACA GTTTTCGCGG TCCCGGTCTG CAGACCGGCC TCGAATGGCT GCAGCGGATC AAAGAGGCTT CCGGTCTGCC GGTGGTCACG GACATCCATG CCCCGGAACA GGCCCGTCCC GTGGCCGATG TGGCCGATGT CCTCCAGATT CCGGCGTTTT TATGCCGCCA GACCGACCTG CTTCTGGCCG CGGCCAAGAC CGGGCGGATC GTGAACGTCA AGAAGGGGCA GTTTCTGGCG CCGTGGGATA TGGCCAATGT TGTGGCCAAG CTCGAAGCCG GTGGGGGGGA ATCCATCTGG CTGACCGAGC GGGGCAGTTC GTTCGGCTAC AACAACCTCG TGGTCGACAT GCGTTCGATC CCGATCATGC AGGACACCGG CTGGCCGGCG GTCTTCGACG CCACCCATTC GGTGCAATTG CCCGGCGGAC AGGGAACGCG TTCCGGCGGG CAGCGGCAAT TTGTCGGGAC CTTGGCCCGG GCTGCCGTGG CGGCCGGCTG CAACGGTATT TTTCTCGAAG TCCATCCCGA CCCGGACCAC GCCCTGTGCG ACGGGCCGAA CAGTTTGGCC CTTGACGCGC TGGCCGGAGA ACTCCGCCGC CTCCTGGCGG TACGGGAGGC TGTGCATGGA AACTAG
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Protein sequence | MTGASDLFSL SRRSLFAIVG PCALEELELG LRVAERLAAI QDELGIPLVF KSSFDKANRS SVDSFRGPGL QTGLEWLQRI KEASGLPVVT DIHAPEQARP VADVADVLQI PAFLCRQTDL LLAAAKTGRI VNVKKGQFLA PWDMANVVAK LEAGGGESIW LTERGSSFGY NNLVVDMRSI PIMQDTGWPA VFDATHSVQL PGGQGTRSGG QRQFVGTLAR AAVAAGCNGI FLEVHPDPDH ALCDGPNSLA LDALAGELRR LLAVREAVHG N
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