| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1600 |
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| Symbol | |
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| ID | 8419430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1848069 |
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| End bp | 1848617 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645038173 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_003198462 |
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| Protein GI | 258405720 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.46023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATCA GATTCAATTT CAAAAGTTTC GAGCCGTCTG ATCACCTCCG GGATTATGCA
GAGAAGCGTT TTGATAAATT GAATAAATAT ATCCACGACA CCGAATCGGC CGACATCCAG
GTCAACCTCG AAGTTGAAAA GATTCGCCAA ATGGCCGAAG TTGTTGTCAA TGCTGACGGA
AACAAGCTGT CGGCCTTCGA AGAAAGCGAA GATATGTACT CGACCATCGA CATGGCCCTG
GACAAGGTCG AGGCGCAATT GCGGAAAATC CGCGACAAGG CCAAGAAAAA GCACCGCATG
GAAGACACCA AGCCGGTGCG CATGGATGTC TTTTCGTATG TGGCCTCGGA AAGCGGCGAG
CAGGTTCGGA ACATCGTCAA GACCGATCAT TACGAACCCA AGCCAATGAC CGTCGACGAA
GCGGCCATGC AACTGGAAAC GCTGGAATAC GAATTCCTGG TCTTCTACAA TGCCGAGAAT
GACAGCGTGA ATGTGATCTA CAAGCGGCGC AACGGCGATT TTGGACTGAT TGATCCGGGG
ATGTATTAA
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| Protein sequence | MQIRFNFKSF EPSDHLRDYA EKRFDKLNKY IHDTESADIQ VNLEVEKIRQ MAEVVVNADG
NKLSAFEESE DMYSTIDMAL DKVEAQLRKI RDKAKKKHRM EDTKPVRMDV FSYVASESGE
QVRNIVKTDH YEPKPMTVDE AAMQLETLEY EFLVFYNAEN DSVNVIYKRR NGDFGLIDPG
MY
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