| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1591 |
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| Symbol | |
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| ID | 8419421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1840456 |
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| End bp | 1841793 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038164 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_003198453 |
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| Protein GI | 258405711 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.712664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGATTTC ATATAATTAC CCACGGTTGC CAGATGAATG TCTGTGATTC GGACTGGCTC
CACCGGGCCC TGGTCGATCT GGGCGGGGAA CCGGCTGATG AAGAATCGGC CGAGGTCTTT
GTCGTCAATA CCTGCAGTGT CCGGGAAAAG CCGGAACAAA AGGTCTACAG TTTGTTGGGA
CGCCTGCAGG GCTATTGGCA GCGCAATCCC AATGTCTTTG TCGCGGTCGG CGGGTGTGTG
GCCCAGCAGG TGGGGACCCG TTTCTGGAAA CGGTTTCCCC ATGTGCGGCT GGTCTTTGGC
ACCGACGGCA TCGCTATGGT GCCCCAGGCG GTCGACCGGT TGCGCAGCGA TCCCCAGCTC
CGGCTTTCGT TGCTGGATTT TGAAGAGCAC TACCCCGAAC GCGAGCAACT CTGGCCCGAG
GCCGAAGTGC CCGCCCAGGC GTTTGTGAAT ATCATGCAGG GTTGCGACAA TTACTGCGCC
TATTGCATCG TGCCGTATAC CCGGGGGCGG CAGAAATCCC GCAGCAGTGC GGCCGTCCTC
CAGGAGTGCC GAGAACTGGC CCGGCGCGGG GCCAGGGAGA TCACGCTTCT GGGACAAAAC
GTCAATAGTT ATGGGCAGGA TGCAAATGGC GACGGCACGT CCTTTGCCGC GCTGCTGGAA
CAGGTCTGCG CCATTCCCGG CATCGAGCAG GTCCGTTTCA CGACCTCGCA CCCCAAGGAT
ATCGCGCCTG AAGTCATTGC CGCCTTCGGA CGTTTGCCGG AATTGAGCCC GCATCTGCAT
CTGCCCCTGC AATCCGGATC GGACCGCATT CTCAAGGCCA TGCGCCGGCG GTATACGCGG
CAGCGGTATC TGGACATCGT CACGGGATTA CGTCAGGCCC GGCCGGAGAT CACCCTGACC
ACCGATCTCA TTGTCGGCTT TCCAGGTGAG ACCGAGGCCG ATTTTGAACA GACCCTGGAG
ATGATGCGCG AGGTCGGTTT TGCCTCGAGC TTTTCCTTCA AATACTCGGA TCGCCCTGGT
GTGGCTGCGG AGCAGATGGA GGACAAGGTC CCCGAGGAGA TCAAATCCCA CCGGCTGCAG
CGGTTGCAAT CCCTGCAGGA GGAACTCACC GGCGAGGCCC TGCAGGCCGA AGTCGGCCGG
CACGTGACCG TGCTCCTCAG AGAACCGGGG CGCCAGGACG GAGGCGGCGT GATCTGGCGG
GGGCGTGACC CCGGCGGGCG CGTGGTCAAT TGCCGCACGG AACTGGACAG TGCGCTGATT
GGCTCGTATG TCGGGGTACG GGTGACAGAG GCCAAAAAAC ATTCCCTGTT TGGGGAAGTG
GAGACAGGCC CATGGTAG
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| Protein sequence | MRFHIITHGC QMNVCDSDWL HRALVDLGGE PADEESAEVF VVNTCSVREK PEQKVYSLLG
RLQGYWQRNP NVFVAVGGCV AQQVGTRFWK RFPHVRLVFG TDGIAMVPQA VDRLRSDPQL
RLSLLDFEEH YPEREQLWPE AEVPAQAFVN IMQGCDNYCA YCIVPYTRGR QKSRSSAAVL
QECRELARRG AREITLLGQN VNSYGQDANG DGTSFAALLE QVCAIPGIEQ VRFTTSHPKD
IAPEVIAAFG RLPELSPHLH LPLQSGSDRI LKAMRRRYTR QRYLDIVTGL RQARPEITLT
TDLIVGFPGE TEADFEQTLE MMREVGFASS FSFKYSDRPG VAAEQMEDKV PEEIKSHRLQ
RLQSLQEELT GEALQAEVGR HVTVLLREPG RQDGGGVIWR GRDPGGRVVN CRTELDSALI
GSYVGVRVTE AKKHSLFGEV ETGPW
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