| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1587 |
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| Symbol | |
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| ID | 8419417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1837953 |
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| End bp | 1838369 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645038160 |
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| Product | protein TolR |
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| Protein accession | YP_003198449 |
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| Protein GI | 258405707 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.437138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTCA ATCCGCATAA AAAAGGGTAT ATAGCCGATA TCAATGTCAC GCCTTTTGTG
GACGTGATGC TGGTATTATT AATTATATTC ATGGTTACTG CACCGCTTTT GACCCAGGGT
GTCGAAGTCG ATCTCCCCCA GACCCAGACG GTGGAAACCC TGCCTGAGGA CAGTCAGGAA
ATCATCCTCA CAGTCAAGAA GGACGGCAGC GTCCTGATCG ACGAATACGA AGTCCCCTTG
GGGGAATTGG ACGCGCATCT GGAAAAGCTG GCCAAGCAGA AGGAAAAGCT GCTCTACCTG
CGTGCGGACA AGGCTGTGCC CTATGGGGTG GTCGTCCAGG TGATGGCCGC AGTGAAACGA
GCCGGGATAA GCAAACTGGG GGTTGTGGCC GAACCCGAAA AACAGGATCG TTCATGA
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| Protein sequence | MEFNPHKKGY IADINVTPFV DVMLVLLIIF MVTAPLLTQG VEVDLPQTQT VETLPEDSQE
IILTVKKDGS VLIDEYEVPL GELDAHLEKL AKQKEKLLYL RADKAVPYGV VVQVMAAVKR
AGISKLGVVA EPEKQDRS
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