| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1577 |
|---|
| Symbol | |
|---|
| ID | 8419407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1827560 |
|---|
| End bp | 1827937 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645038150 |
|---|
| Product | glycine cleavage system H protein |
|---|
| Protein accession | YP_003198439 |
|---|
| Protein GI | 258405697 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
|---|
| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.731987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCTG AAGATCTGTT GTATACGAAA TCCCACGAAT GGGTCCGTGT CGAGGACGGC
CAGGTCACGA TGGGCATCAC CCACTTTGCC CAGGAACAAC TCGGCGACCT GACCTTTGTT
GAATTGCCGG CTCCCGGCGA TCAGGTTGAA GCCGGTCAGG AAATCGCCAC CGTGGAATCA
GTCAAGGCCG CAAGTGAGGT CTACGCCCCG GTCAGCGGCG AGATCCTGGC CATTAATGAG
GATCTCGAGG ACGCCCCGGA AAAGATCAAC GCCGACCCCT ACGGCGAGGG ATGGATGGTG
CGCATCAAGA CCGACGGCGA GCCGGAAGGT CTGATGGACG CCGAGGCCTA CACCCAACAC
CTGAGCGAAC AGGAATAG
|
|---|
| Protein sequence | MLPEDLLYTK SHEWVRVEDG QVTMGITHFA QEQLGDLTFV ELPAPGDQVE AGQEIATVES
VKAASEVYAP VSGEILAINE DLEDAPEKIN ADPYGEGWMV RIKTDGEPEG LMDAEAYTQH
LSEQE
|
|---|
| |