| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1567 |
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| Symbol | |
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| ID | 8419397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1815968 |
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| End bp | 1816987 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038140 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003198429 |
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| Protein GI | 258405687 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00816314 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0470804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATG CGTCGCGTTC AAAGGTCCTC GCCGGGGTGG CAATCTGCCT CGGATGGATT
TTCCTGGCGG GCTGCGCCAA TCTGCAAACT CGATTCGACA GTGTCCTGAC CTCGTATCAG
GGACAGCGCT ACCTGGAAGA ACACGAATAC GCCCTGGGGG TCGAGGACTT GTCCCACCGG
CTCAAGCAGC AGCCGGACAA CGGTGCGGCC GCCTATTGGC TGGGCCGGCT TTATCTGGCC
CAGGAGCACC CCAGCAAGGC CCTGCCTGCT TTACAAAAAG CGGTGGAACT CAAACCGCAA
TACGCAGACG CCCATTTCTG GCTCGGTGTC GCCCATTGGG CGATGATGGA TTTCGAGAAG
GAGCGGTTGG CCTATGAACG GGCTCTGGCT CTCGAGCCTG ACCACACCCA GGCACGGGTC
TATCTCGGCC ACCATTATGT GGATCGGGAG CAATGGTCTC TGGCCCTGAT CCATTATCGG
CGTGTCCTGG ATGAAGAGCC CGGCCATCCT TCCGCTCTTT TTTATACGGC CGAATGTCTG
GAACAACTGG GGCGGGAACA AAGCGCCCGG CAGGCCTGGA AAGCGTATCT GGACCGCTAT
CCCGACGGTG GGCGGGCCCT GGAGGCGACC CGGCGTCTGA ACGGGTTCGG CGACTTCAGT
TATCGCAACA TCATTCTCGG CAAGCGGCAG GTGACCATCG AAAAAATCCG TTTCGAACAG
GGCACAGCCA CATTGAAGTC CTCCAGTCTG CCCTCACTGG ATCTGATCGG GGCGAACCTG
GAGCGCCGTT CTGATCTCCG TTTGCACGTG ATTGTCTATG TCCAGGAGGA TGCAGCGCTG
GCCCGGAAAC GGGCGCAGGC CATTGAGGAG GCGATTGTCC AGCGCACGAG CGGAGCCGAT
TCCGAACAAC TCCTCTTGAG CTGGTTCGGT CAGGCCGAAA CGATCACAGT GGATGGCGAA
CGTTTCCAAG AACCGCGGTC GGTCCATTTT GTCACCGAGG CCGGGCCGGA CGTATCCTGA
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| Protein sequence | MPNASRSKVL AGVAICLGWI FLAGCANLQT RFDSVLTSYQ GQRYLEEHEY ALGVEDLSHR
LKQQPDNGAA AYWLGRLYLA QEHPSKALPA LQKAVELKPQ YADAHFWLGV AHWAMMDFEK
ERLAYERALA LEPDHTQARV YLGHHYVDRE QWSLALIHYR RVLDEEPGHP SALFYTAECL
EQLGREQSAR QAWKAYLDRY PDGGRALEAT RRLNGFGDFS YRNIILGKRQ VTIEKIRFEQ
GTATLKSSSL PSLDLIGANL ERRSDLRLHV IVYVQEDAAL ARKRAQAIEE AIVQRTSGAD
SEQLLLSWFG QAETITVDGE RFQEPRSVHF VTEAGPDVS
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