| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1562 |
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| Symbol | |
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| ID | 8419392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1807265 |
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| End bp | 1807999 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645038135 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_003198424 |
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| Protein GI | 258405682 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.297066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGATA CACCACTTTT CTATCTCCCC CCGTCCGAAT GGGACCCTGC CGGCATGACC
CTGCAGGGCC AGGAGTTTAC CCACCTGCGC AAGGCGCTGC GTCTGGGCCC GGGCGACGCG
GTCCAACTAA CCAACGGCCG GGGCGACGTC GCCGACGGCC GCATTGAAGC TATCCAGGGC
AAAAAGGCCC GCATCACCGT GGAGTCCATC ACCTCCGTGG ACCGCCGGGA CAGCCAGATC
GTAGTGGCCG TGGGCTGGGC CAAATCGCTG CGCCGGGGGT GGTTTCTGGA AAAGGCTGCC
GAACTCGAGG CCCGCGGCGT CTACCTCTGG CAAGCCGAAC ACAGCCAGGG GCGGATTCCC
GACGCAACCA AAGCAAACTG GCAGGGGCAA CTCGTGGCCG GGGCCAAACA ATCCGGCAAT
CCGTGGCTCC CGGAACTCGA GGTCTTTCCC GGCGGCTTGG CCGAACTTCT GGAAGCCACC
GCGGACATCG ACCACCGCTT TTTTTTATGG GAAAACGCCA CTGCCGAAGA AGGCTTCCAT
CCCCCACCGT TGGCCGACGG AGAACGCGCC CTGGCCATTT TAGGGCCGGA AGGCGGTTTC
GCGGACAGCG AGGTGGAACT CCTGCGGGCC CACAACGTTC GCCCCGTGTC CCTGGGCCGC
CGGGTGCTGC GCTGGGAAAC CGCGGCATTG CTCTGTCTGG GGTTGTGCTG GTGGCACAAA
GAGCGCAGTT CCTGA
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| Protein sequence | MHDTPLFYLP PSEWDPAGMT LQGQEFTHLR KALRLGPGDA VQLTNGRGDV ADGRIEAIQG
KKARITVESI TSVDRRDSQI VVAVGWAKSL RRGWFLEKAA ELEARGVYLW QAEHSQGRIP
DATKANWQGQ LVAGAKQSGN PWLPELEVFP GGLAELLEAT ADIDHRFFLW ENATAEEGFH
PPPLADGERA LAILGPEGGF ADSEVELLRA HNVRPVSLGR RVLRWETAAL LCLGLCWWHK
ERSS
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