| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1559 |
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| Symbol | |
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| ID | 8419389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1803838 |
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| End bp | 1804917 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645038132 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_003198421 |
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| Protein GI | 258405679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.338769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCCC TCACGACCAC GCCGCTGACC GATTGGCACC AGGACCACGG CGCCAAGATG
GCCCCGTTCG CCGGCTGGAA CATGCCCATC CAGTACGAAG GCATCCTGGC CGAGCATAAA
CACACCCGCA CCCAGGCCGC CCTGTTCGAC ATCTGCCACA TGGGCGAATG CCGCATCACC
GGCCCCGGCG CCCGCGACGG CCTGGACCGC ATCGTGACCC ACAATCTGGA ACGCCTCCGC
CCGGGGCGCT GCAGCTACGG CTTCCTTCTG ACCCCTGAAG GCACGGTCCA GGACGACCTC
ATCGTCTACT GCCTGGACGA GGACGACTTC ATGCTCGTGG TCAACGCCGC CTGCCAGGAG
ACCGACTTCA CCTGGCTCCG CGAACACCTG CCCGCCGGGG TGGCCTTTGA GGACATTTCC
GAGGCCACGG CCAAGATCGA CCTCCAAGGT CCGACCTCCA TCGCCGCCCT GGAACGGGTC
TTGCCCGGCG CCTGGCGCGA ACTCAAATTT TTCGGGCATT GTCCAAGCTC GTTCGGCGGT
CAATCCCTGC GGGTCAGCCG GACCGGATAC ACCGGAGAAC TCGGCTACGA GATCTACCTG
CCCCGGGAAC AGGCCGTCTC CCTCTGGGAG CAATTCCTGG ACGGGGAAGA CGTCAAACCC
GCTGGACTCG GCGCCCGCGA CACCTTGCGC CTCGAAGCCG GCCTGCTGCT CTACGGTCAG
GACCTCGACC GCGAACACAC CCCGGCCGAA GCCGGATACG CCGGCATGCT GACCTCGCAA
GCCCCGTACA TCGGCAAGGA CAACGCCCTG ACCGTGCGCG ACAAGCTCGT TGCCCTGCAA
TTCGAGGGCC GGCGGACCGC CCACCACCAC GACACGGTCC TCGACGCCTC CGGCGCGCCG
GTAGGGACCA TCACCAGCGC CTCTTTCGCC CCCTCGCTGG GCCACGCCAT CGGGCTGGCC
TATATCCAGG CCGACGCCGC AGACCAGGAC CAGTACACGG TCCAAACCAA ACGCGCCGCC
TTGACGGCTA CGGTGACCAG CCTGCCGTTT TACAACGGCA CCGCGCGGAT GAAGTTGTAA
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| Protein sequence | MDSLTTTPLT DWHQDHGAKM APFAGWNMPI QYEGILAEHK HTRTQAALFD ICHMGECRIT
GPGARDGLDR IVTHNLERLR PGRCSYGFLL TPEGTVQDDL IVYCLDEDDF MLVVNAACQE
TDFTWLREHL PAGVAFEDIS EATAKIDLQG PTSIAALERV LPGAWRELKF FGHCPSSFGG
QSLRVSRTGY TGELGYEIYL PREQAVSLWE QFLDGEDVKP AGLGARDTLR LEAGLLLYGQ
DLDREHTPAE AGYAGMLTSQ APYIGKDNAL TVRDKLVALQ FEGRRTAHHH DTVLDASGAP
VGTITSASFA PSLGHAIGLA YIQADAADQD QYTVQTKRAA LTATVTSLPF YNGTARMKL
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