Gene Dret_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1548 
Symbol 
ID8419378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1792292 
End bp1792648 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content59% 
IMG OID645038121 
Productpreprotein translocase, SecG subunit 
Protein accessionYP_003198410 
Protein GI258405668 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1314] Preprotein translocase subunit SecG 
TIGRFAM ID[TIGR00810] protein translocase, SecG subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.651652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCCT TGATTCTCAC GGTGCATATC ATCGTCTGTG TTAGTCTAGT CACCCTGGTC 
CTGCTCCAAT CCGGTAAGGA GGGCATGGGG GTTATTTTCG GTGGCTCCAG CGGCACGGTC
TTCGGGAGTT CCGGAGCCGG CGGCCTGCTG TCCAAGCTGA CCGCGGGGGC GGCCACCATT
TTTATTATTA CCTCCCTGGC CTTTACCTAT ATGAGCGCCC AGGAACGCCA GGCGCCGCGG
GAATCGGTGG TTCTGGAACA ACCAGCCCAG CAGCAAGCAC CGGCTACGGC GCCGGGAACG
GAAAAAAGTG CTGGACAAGA GGGCTCGAAG GCTGTAAATA GCTCCTCTGC CGATTAA
 
Protein sequence
MNALILTVHI IVCVSLVTLV LLQSGKEGMG VIFGGSSGTV FGSSGAGGLL SKLTAGAATI 
FIITSLAFTY MSAQERQAPR ESVVLEQPAQ QQAPATAPGT EKSAGQEGSK AVNSSSAD