Gene Dret_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1521 
Symbol 
ID8419350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1766072 
End bp1766590 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content54% 
IMG OID645038095 
Producthypothetical protein 
Protein accessionYP_003198385 
Protein GI258405643 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CCCAATCCCT TCTCCGCCCC AAAGTCAGAC AGCACCTGAT TTTCTGCGTT 
TGTCTTGTTC TTCTCGCCAT TGCCTTGCCG TTTGCATACC AGACCTGGCA GCGGGGCCAG
GTATTGTTGC ATCAGGGCCA AAAGGCTCTT GCGGCCGAGA ATTATGCGCA AGCTGCTACC
TATCTGGAGC GGGCCCACCG CGCAGGCCTT GATTCTGTGC GACTCTTGCA CCAACTGGCG
CAGGCCAATG TCCAGATAGA TTGCTGGGAT CAGGCCGAAG AGGTTTACCG GAAGATTGTC
CATAACAATC CGGACAAACT CGAATTCCAA TTGGAGCTGG CCCAGGTGCT TTTCGTTCGC
GGCCATTTGC AACAGGCAAT GCAGCGAGTG CAATCCATTT TGGCCCAGCG GCCAAAGTGG
TCCCAGGCCC TGTATCTCAA AGGCAAAATA TATACGAGTG CTGGGGACTT TGAAGCGGCT
ATTGCAGTTT ATCGAAAGAT CTTGGGAGAA ACCACATGA
 
Protein sequence
MSLPQSLLRP KVRQHLIFCV CLVLLAIALP FAYQTWQRGQ VLLHQGQKAL AAENYAQAAT 
YLERAHRAGL DSVRLLHQLA QANVQIDCWD QAEEVYRKIV HNNPDKLEFQ LELAQVLFVR
GHLQQAMQRV QSILAQRPKW SQALYLKGKI YTSAGDFEAA IAVYRKILGE TT