Gene Dret_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1515 
Symbol 
ID8419344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1759184 
End bp1759849 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID645038089 
Producthypothetical protein 
Protein accessionYP_003198379 
Protein GI258405637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.845071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCAT ATATAATACA CCGCCGGCTG ACTTGTGTTT TGCAAGCCAT TCTGGCCATC 
GAAATCGTCT TTGCTATCTG GGAGCAACAA TGGCTCACAG CGGTAATCAC GCTGGGGATC
AGCGGTATTA CCCTCGGCCC GTTTTTTGTG CGTAAATTTT TCCGCGTCTG TATTCCCCCT
GAATTCGTCC TTCTGGGGAT TACCTTTGTT TTTGCCTCCC TTTTTTTGGG CGAAGTCCAC
GGATACTATT CACGCTTCTG GTGGTGGGAT ATCGCTCTGC ATTCCGGGTC GGGATTCGGT
CTCGGTATTA TTGGCTTTCT CTTGGTTTAT GTCCTGAATG AAAACGAGAA TATCGGGGTG
CACATGAACC CCGGTTTCGT GGCCCTGTTC GCGTTTCTTT TTGCCGTGGG TATCGGCGCG
TTGTGGGAAA TATTCGAATT CAGCATGGAC AGTCTCTTGA AGACAAATAT GCAAAAGGCC
ATGCTCGGCG ACCCCTCCGG GCTGACCGAC ACCATGTGGG ATTTGATCGT GGACACCTTG
GGTGCGCTGC TTATCTCGGT GCTCGGGTAT GGGTACATCA AGACGGCCCA AAGCGAATCT
TTCCTGGAAC GCTGGATACA CGCCTTTATC TCCAGCAATC CCCACCTGTT TAATAAGTCC
CGCTAA
 
Protein sequence
MRPYIIHRRL TCVLQAILAI EIVFAIWEQQ WLTAVITLGI SGITLGPFFV RKFFRVCIPP 
EFVLLGITFV FASLFLGEVH GYYSRFWWWD IALHSGSGFG LGIIGFLLVY VLNENENIGV
HMNPGFVALF AFLFAVGIGA LWEIFEFSMD SLLKTNMQKA MLGDPSGLTD TMWDLIVDTL
GALLISVLGY GYIKTAQSES FLERWIHAFI SSNPHLFNKS R