Gene Dret_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1477 
Symbol 
ID8419306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1707151 
End bp1707885 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content60% 
IMG OID645038052 
Productconserved hypothetical cytosolic protein 
Protein accessionYP_003198342 
Protein GI258405600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000542164 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTGCT ACATTGGATT CGACGACACC GACACCCTGC ATTCGGACCT CGGTACCGGC 
AAATACGCCC GCTATTTTGC CCAGAGCATC CAGGCGGATT TCCCGGTCAC CGGTGTCGTG
CGGCAGCAAT TCCCTCAGTT ACCGGATATC CCGTTTACGA CCCACAACAG CTCCGCCTGT
GTCATTGTCG AGGTCGAGAG CACGGCAGAT GTCGATCGGC TCAGAGAAGC GGCTGTGGGC
CATATCCAGA ACTATTTCCA GGACGGCAGT GATCCCGGAC TTTGTCTCGC GTGTGAAACG
AACCGCTGCG CGGATATCGA AAACTTCGGC CGTCTTTGCA GTTCGCGCAT TGTTTCCCAG
GACGAGGCCT ATGCCATCGC CCGCCCGATC CACCTCTCCG GGCACGGCGG CACCAATGAC
GGCATCATCG GGGCCCTGGC CGGGGTCGGA CTGACCATGT CCGGCTGGGG GGGCAGCTTC
ATCGATTTCG GTGACATCCG CTCTCTGCCG CCGGAGATTC CCATCGGCGA GCTGCGGCGG
CGCGGCATCG AACCGGTGGC CGCCGTCCGT AAGGGATTAG TCCCGCACGA CGACCAATAC
GTGGACACCA GCTATGGTAT CCGTCCCCGG CTCTGGGGTG GGCGTCCAGT GCTTTTGCTA
CTGCAAAAGG ACGACTTCAA TTGGATCCCC TCGGACCGGC GCAAGAAAGG GCCTTTTGTC
CAGGATCTCA ACTAA
 
Protein sequence
MKCYIGFDDT DTLHSDLGTG KYARYFAQSI QADFPVTGVV RQQFPQLPDI PFTTHNSSAC 
VIVEVESTAD VDRLREAAVG HIQNYFQDGS DPGLCLACET NRCADIENFG RLCSSRIVSQ
DEAYAIARPI HLSGHGGTND GIIGALAGVG LTMSGWGGSF IDFGDIRSLP PEIPIGELRR
RGIEPVAAVR KGLVPHDDQY VDTSYGIRPR LWGGRPVLLL LQKDDFNWIP SDRRKKGPFV
QDLN