Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1476 |
Symbol | |
ID | 8419305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1706590 |
End bp | 1707135 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038051 |
Product | hypothetical protein |
Protein accession | YP_003198341 |
Protein GI | 258405599 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000165902 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATTAGAC GCACTCACTC TGTAGATTCG CTGCAAAACG CCCTTTTTTT GGGGTTTTGC GCCGTATTGA TTGTGGCAGC CAAGCTCTTT TTCCGCTGGC ATCTGAACAT TTCCGGCCAT TCCATGTTCT TTATCGCCTT TTTCCTGCTC CTGGCCAAAG CTGTGGTCCC GAAACGGTGG GCCGCGTCCA CCGTCGGGCT CTGGGCCGGA CTCATGGTCG TGGTTCTGGG GTTAGGCAAA GGGGGGCCGC TTCAACTGAC CAAATACCTT TTCCCTGCCC TGGCCGTGGA TTTCGGAGGC ACGCTTGTGC CGCGCTGGGC CGGGTCGGTG TGGGGATGCG CCCTGCTCGG GCTCGCTGCC GGGGCAGGGA AATTTCTGGC CAACGTCTTT ATCGACTGGC TGGTGGGTAT GGATATGGGG GTGCTTTTGC TCCACGCAAC GATCAAAGCT GTGGGAGGAC TCTTTTTTGC CGTCCTCGGC AGCCTTCTGG TCCCGCCGGT TCTCAAACGA TTGCGGGCCC ACGGGCTACT TCCTGTTTTC AAATAA
|
Protein sequence | MIRRTHSVDS LQNALFLGFC AVLIVAAKLF FRWHLNISGH SMFFIAFFLL LAKAVVPKRW AASTVGLWAG LMVVVLGLGK GGPLQLTKYL FPALAVDFGG TLVPRWAGSV WGCALLGLAA GAGKFLANVF IDWLVGMDMG VLLLHATIKA VGGLFFAVLG SLLVPPVLKR LRAHGLLPVF K
|
| |