| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1471 |
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| Symbol | |
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| ID | 8419300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1699663 |
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| End bp | 1701081 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038046 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003198336 |
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| Protein GI | 258405594 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.352994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0159158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC CCAAATATCA AGATATTGAA GAGCACATCC TCGAACTCAT CGCCACGCGG
ACCATCGGGC CCGGTGACCG GCTCCCTTCG CTTCGCGAAC TCAAACGCCA GACCCGAAGC
AGTATCGCCA CGGTCACGAG GGCCTACGAG GAACTCGAAC GCAAACAGAT CATCGAATCC
CGTCCCCGCT CCGGGTATTT TGTCCTTGAC CACGTCCAGG AATTGCCCCC GCCTCCAGCG
CCACCCCGCC CGGATCTGGC CTCACGCCCC GCCACCCGCA ATCAGCTGAT ACGGGAGGTC
CTCAAGGGAG TCGGCAACAA GGATCTCATC CCCTTGAGTA TCATCTGTCC CGATGAACGG
TTGCTGCCCA CCGCCGCGCT GCACCGCTGC CTGGGCCGTG TCTGTCGCGA CCATCCCCAT
AGCGCGGTCG CCTACGAACA AGTGGAGGGC AACGCCGGAC TGCGCAAACA GATTTGTCTG
CACGCCATGG AAGCCGGGAT CGCGGTCCAT CCCGACGAGA TTCTCGTCAC CACCGGTGCC
ATGGAGGCCC TGTCCATTGC CATCAGGAGC TTGACCACTC CTGGCGACAA TGTCCTCATC
CAATCCCCGA CCTACTTCTG TTTTCTCCAG TTATTGGAAA ACTGCGGCTT GCGGACCGTT
GAGATCCCCT CCCATCCCGA ACACGGCGTC AATCCGGCCG ATCTGCGCCG GGCTGTAGAC
CGTTTCGACA TCACCGCCTG CATCCTGGCG CCCAACTACA ACAACCCCGA CGGCGGACAG
ACCCCGGAGG CGGCCCAGCG GGAGATTGTC GACATTCTGG CCCGACGGCG AGTGCCGCTG
ATCGAAGACG ACGTCGCTGG CGACCTGTTC TTCGGCTCCA GGCGGCCGCA TTGCTACAAG
GCGGCGGACG CAGAAGGCCT GGTGCTTTCC TGCGGGTCCT TTTCCAAAAC CCTTTCGCCA
GGCTACCGAG TCGGCTGGCT CATGCCCGGT CGTTTCTTGG CCAAGGCCTA CGAGATCAAG
GCCACCTCAA ACATCTCCTC AGCAACCCCA ACGCAGATGG CGGTCGCCGA CTATCTGCGT
TCCGGCCATT TCGACCGTCA TCTGCGCCGT TTGCGCCAGG CTTTGTCGCG CCAGATGCAA
TCCGTGCAAT GGGCTGTGGG GCGGTATTTC CCTGCCGGCA CGCGCATGAC CCACCCCCGC
GGCGGCAGTG TCCTCTGGGT GGAATTGCCT GGAGACATCG ATGCCGTCGA TTTTTTTGCC
CGGGCAGTCG CAAACGGGAT CAGTATCGCT CCGGGTCCGA TCTTTTCCAC CCAGGACAAT
TTCAGCCATT TCATCCGCTT GAGTTGCGGC GGCGTCTGGG ACGCAACCAT CGAGCACGGG
TTGCAGCGCC TTGGTGACCT CGCCCGGGCC GCCCAATAA
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| Protein sequence | MNKPKYQDIE EHILELIATR TIGPGDRLPS LRELKRQTRS SIATVTRAYE ELERKQIIES
RPRSGYFVLD HVQELPPPPA PPRPDLASRP ATRNQLIREV LKGVGNKDLI PLSIICPDER
LLPTAALHRC LGRVCRDHPH SAVAYEQVEG NAGLRKQICL HAMEAGIAVH PDEILVTTGA
MEALSIAIRS LTTPGDNVLI QSPTYFCFLQ LLENCGLRTV EIPSHPEHGV NPADLRRAVD
RFDITACILA PNYNNPDGGQ TPEAAQREIV DILARRRVPL IEDDVAGDLF FGSRRPHCYK
AADAEGLVLS CGSFSKTLSP GYRVGWLMPG RFLAKAYEIK ATSNISSATP TQMAVADYLR
SGHFDRHLRR LRQALSRQMQ SVQWAVGRYF PAGTRMTHPR GGSVLWVELP GDIDAVDFFA
RAVANGISIA PGPIFSTQDN FSHFIRLSCG GVWDATIEHG LQRLGDLARA AQ
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