Gene Dret_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1467 
Symbol 
ID8419296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1695924 
End bp1696940 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content63% 
IMG OID645038042 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_003198332 
Protein GI258405590 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0235653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC TCCAAACTCT CCCCCCCAGG CAGGCCCATT TCTGTCTTGA AGTCGACCGG 
TTCGTCCGGG AGGAGCTCAC AATCTCCTTA GCTGGGACCC ACGTGATGCT GGCCGTCTCC
GGAGGGGTCG ATTCCGTGGC CCTGCTGGCT TGGGCCGCTG CCATGCGCGA CAAATGGGGG
GCCAGACTCT TCTGTGCCCA CCTCGACCAC GGCCTGCGCC CCGAATCCTC GCAGGAGCGC
CAGCGTGTCC ACGCCCTTTG CGACCAGCTC GCTATCCCAT GTTTTTCCGG TCGCAGCGAG
ACCCGGCGCT ACGCCCAACG TTGCCAACTC GGGATCGAAG AAGCCGGGCG CCTTCTGCGC
TACCGGTATC TTGAGGGCAT CGCCCACCGC CGCGGTTGCG ATTACCTGCT CACCGCCCAC
CACGCCAACG ACCTTGCTGA AGACAGTCTG ATGCGCTTTA TCCGCGGCAC CGGCTGGCCG
GCCCTGGCGG GCATGGCGGC CTGGGACCCC GGCCGCCGCC TCCTGCGCCC GTTTCTGCTC
ACGCCCAAAC ACCGCCTCCA TGCGCTGGTC CAGGCAGCCG GGCTCTGCTG GGAAGAAGAC
AGTTCCAATC GCGATCCCGC CTACCAGCGC AACAGGATTC GCCACCAGAT TCTGCCCCTG
CTGATCAAAG AGAATCCGAA TTTTCTGGAG ACCATTGCCC AGACCTGGCG CCAAGCCCAA
GCCGACACCG CCGCATTTGA CACGATGCTG ACCGCGGCCA GACAGGCGGA GCGCGTGGTG
AAACAAGGCT TGCTTGCCCC ACGACAGGAA TTGGAATCCC TTCCTGCGGC CCTCAGATTG
CGCTGGTACA AGGAGATCCT GGACCGCATG GGCCCCGGAC AGGCCCTGTC CGCCAACCTG
GGTGCTCTCG ACGCCTTGTA TACAGAGAAA AAATCAGGGA AAAGAGTGCA ATTTCCCGGG
GACAAGCAGG CCAGAGTGAG CCCGGAGGGG ATTATCTTTG GATGGAAAGG GGACTGA
 
Protein sequence
MLRLQTLPPR QAHFCLEVDR FVREELTISL AGTHVMLAVS GGVDSVALLA WAAAMRDKWG 
ARLFCAHLDH GLRPESSQER QRVHALCDQL AIPCFSGRSE TRRYAQRCQL GIEEAGRLLR
YRYLEGIAHR RGCDYLLTAH HANDLAEDSL MRFIRGTGWP ALAGMAAWDP GRRLLRPFLL
TPKHRLHALV QAAGLCWEED SSNRDPAYQR NRIRHQILPL LIKENPNFLE TIAQTWRQAQ
ADTAAFDTML TAARQAERVV KQGLLAPRQE LESLPAALRL RWYKEILDRM GPGQALSANL
GALDALYTEK KSGKRVQFPG DKQARVSPEG IIFGWKGD